RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-206	ENST00000588300	RGS9	O75916	674 aa	Predicted RBP	13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	IGHV2-5	P01817	119 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	WNT5A	P41221	380 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	OR1E2	P47887	323 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	HILS1	P60008	231 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	ERVK-25	P63136	954 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	TOP3A	Q13472	1001 aa	Predicted RBP	13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	LAPTM4A	Q15012	233 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	ALG10	Q5BKT4	473 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	COQ5	Q5HYK3	327 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	SPATA46	Q5T0L3	261 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	THEM4	Q5T1C6	240 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	FAM27B	Q5VT28	67 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	SLC25A47	Q6Q0C1	308 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	C1orf174	Q8IYL3	243 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	AKR7L	Q8NHP1	331 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	FNDC8	Q8TC99	324 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	MARS2	Q96GW9	593 aa	Known RBP	13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	JMJD8	Q96S16	334 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	ALG12	Q9BV10	488 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	MRGBP	Q9NV56	204 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	HIF3A	Q9Y2N7	669 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	CACNG2	Q9Y698	323 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	TANC2	Q9HCD6	1990 aa		13.54	□□□□□ -0.24
ERCC1-206	ENST00000588300	TENM1	Q9UKZ4	2725 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	LOC100509620	A0A075B734	347 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	TRIM77	I1YAP6	450 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300		J3QLI3	93 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	SPRY3	O43610	288 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	NPPA	P01160	153 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	AVP	P01185	164 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	IGHV1-46	P01743	117 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	MAK	P20794	623 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	MPV17	P39210	176 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	MMP15	P51511	669 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	PSG4	Q00888	419 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	SLC3A1	Q07837	685 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	ST3GAL3	Q11203	375 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	DCAF12L2	Q5VW00	463 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	MBNL2	Q5VZF2	373 aa	Known RBP	13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	C1QL2	Q7Z5L3	287 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	ALDH16A1	Q8IZ83	802 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	SLC25A40	Q8TBP6	338 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	CCL17	Q92583	94 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	RBP7	Q96R05	134 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	GAL3ST1	Q99999	423 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	TMEM120A	Q9BXJ8	343 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	TMPRSS13	Q9BYE2	586 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	OR2J1	Q9GZK6	312 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	EGLN1	Q9GZT9	426 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	CYSLTR2	Q9NS75	346 aa		13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.53	□□□□□ -0.24
ERCC1-206	ENST00000588300	HTR3E	A5X5Y0	456 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	BBIP1	A8MTZ0	92 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300		H3BSA7	217 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	MRAS	O14807	208 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	PIP5K1C	O60331	668 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	IGHM	P01871	453 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	CST2	P09228	141 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	IFI30	P13284	250 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	GATA3	P23771	443 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	LAP3	P28838	519 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	IFNA8	P32881	189 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	LIPA	P38571	399 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	GUCA1A	P43080	201 aa	Predicted RBP	13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	RPL27	P61353	136 aa	Known RBP	13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	PCBD1	P61457	104 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	LRRC23	Q53EV4	343 aa	Predicted RBP	13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	CYBRD1	Q53TN4	286 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	FAM205BP	Q63HN1	556 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	RFPL4B	Q6ZWI9	263 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	PEG10	Q86TG7	708 aa	Known RBP	13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	ABHD4	Q8TB40	342 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	KLF14	Q8TD94	323 aa	Predicted RBP	13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	FAM216A	Q8WUB2	273 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	C10orf82	Q8WW14	230 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	BPIFA2	Q96DR5	249 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	PRRC1	Q96M27	445 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	ZNF583	Q96ND8	569 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	RBM4	Q9BWF3	364 aa	Known RBP	13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	SUCNR1	Q9BXA5	334 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	OR2H1	Q9GZK4	316 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	WNT5B	Q9H1J7	359 aa		13.52	□□□□□ -0.25
ERCC1-206	ENST00000588300	DYSF	O75923	2080 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	ISPD	A4D126	451 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	ZSCAN5B	A6NJL1	495 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	FAM220BP	B1ANY3	271 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	ICMT	O60725	284 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	UBOX5	O94941	541 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	ADH4	P08319	380 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	KDELR2	P33947	212 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	COMP	P49747	757 aa	Predicted RBP	13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	ARHGDIA	P52565	204 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	ARFIP2	P53365	341 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	CTXN1	P60606	82 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	PPP1CB	P62140	327 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	MAPRE2	Q15555	327 aa		13.51	□□□□□ -0.25
ERCC1-206	ENST00000588300	ZMAT1	Q5H9K5	638 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms