RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ZNF416Q9BWM5 594 aa12.23□□□□□ -0.45
VMP1-206ENST00000587945 SMURF2Q9HAU4 748 aa12.23□□□□□ -0.45
VMP1-206ENST00000587945 MAN2C1Q9NTJ4 1040 aa12.23□□□□□ -0.45
VMP1-206ENST00000587945 CACNG2Q9Y698 323 aa12.23□□□□□ -0.45
VMP1-206ENST00000587945 FFAR1O14842 300 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 TPD52L2O43399 206 aaKnown RBP12.22□□□□□ -0.45
VMP1-206ENST00000587945 TCF21O43680 179 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 ZNF682O95780 498 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 TFP02787 698 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 MSMBP08118 114 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 ITGA2P17301 1181 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 GDI2P50395 445 aaKnown RBP12.22□□□□□ -0.45
VMP1-206ENST00000587945 LIPEQ05469 1076 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 FHL1Q13642 323 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 PCGF3Q3KNV8 242 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 FAM27BQ5VT28 67 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 TBPL2Q6SJ96 375 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 USP51Q70EK9 711 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 SLC15A3Q8IY34 581 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 RFLNBQ8N5W9 214 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 OR13C2Q8NGS9 318 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 LRRC37BQ96QE4 947 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 RBP7Q96R05 134 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 ALG12Q9BV10 488 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 FNDC11Q9BVV2 318 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 OR2H1Q9GZK4 316 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 METTL17Q9H7H0 456 aaPredicted RBP12.22□□□□□ -0.45
VMP1-206ENST00000587945 ZNF446Q9NWS9 450 aa12.22□□□□□ -0.45
VMP1-206ENST00000587945 IGHV1-69-2A0A0G2JMI3 117 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 A0A1W2PPL8 197 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 EFCAB9A8MZ26 197 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 H7C1C5 153 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 CXCR6O00574 342 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 SPRY3O43610 288 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 IGHV3-13P01766 116 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 IGHMP01871 453 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 IFNW1P05000 195 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 SCG5P05408 212 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 IFNA8P32881 189 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 CRYBB2P43320 205 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 ZNF81P51508 661 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 LCN6P62502 163 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 PRKCDQ05655 676 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 HNRNPA0Q13151 305 aaKnown RBP12.21□□□□□ -0.45
VMP1-206ENST00000587945 TRAM2Q15035 370 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 TAF11Q15544 211 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 ZNF774Q6NX45 483 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 RFPL4BQ6ZWI9 263 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 OFCC1Q8IZS5 231 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 OR51F2Q8NH61 342 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 SLC25A40Q8TBP6 338 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 IPCEF1Q8WWN9 437 aaPredicted RBP12.21□□□□□ -0.45
VMP1-206ENST00000587945 LZICQ8WZA0 190 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 MARS2Q96GW9 593 aaKnown RBP12.21□□□□□ -0.45
VMP1-206ENST00000587945 OR2J1Q9GZK6 312 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 OCEL1Q9H607 264 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 DECR2Q9NUI1 292 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 NKIRAS2Q9NYR9 191 aa12.21□□□□□ -0.45
VMP1-206ENST00000587945 EIF3KQ9UBQ5 218 aaKnown RBP12.21□□□□□ -0.45
VMP1-206ENST00000587945 A0A087WUU8 490 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 NME4O00746 187 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 GSTA4O15217 222 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 NGFP01138 241 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 IGHV1-46P01743 117 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 CST2P09228 141 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 NR2C1P13056 603 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 COX4I1P13073 169 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 PCMT1P22061 227 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 GCH1P30793 250 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 GPR4P46093 362 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 SLC7A2P52569 658 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 ENDOGQ14249 297 aaKnown RBP12.2□□□□□ -0.46
VMP1-206ENST00000587945 MOGQ16653 247 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 ZNF718Q3SXZ3 478 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 FAHD2BQ6P2I3 314 aaPredicted RBP12.2□□□□□ -0.46
VMP1-206ENST00000587945 ZNF730Q6ZMV8 503 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 ZNF771Q7L3S4 317 aaPredicted RBP12.2□□□□□ -0.46
VMP1-206ENST00000587945 OAFQ86UD1 273 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 RP9Q8TA86 221 aaKnown RBP12.2□□□□□ -0.46
VMP1-206ENST00000587945 ABHD4Q8TB40 342 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 KLF14Q8TD94 323 aaPredicted RBP12.2□□□□□ -0.46
VMP1-206ENST00000587945 GEMIN6Q8WXD5 167 aaKnown RBP12.2□□□□□ -0.46
VMP1-206ENST00000587945 FAHD2AQ96GK7 314 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 ZNF665Q9H7R5 613 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 SAP30LQ9HAJ7 183 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 EMC7Q9NPA0 242 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 METRNQ9UJH8 293 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 ADAM18Q9Y3Q7 739 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 GRIP1Q9Y3R0 1128 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 WIPI2Q9Y4P8 454 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 TIMM10BQ9Y5J6 103 aa12.2□□□□□ -0.46
VMP1-206ENST00000587945 GMNCA6NCL1 334 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 A6NIZ1 184 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 ZSCAN5BA6NJL1 495 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 CDC42EP2O14613 210 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 SLC22A2O15244 555 aa12.19□□□□□ -0.46
VMP1-206ENST00000587945 RGS9O75916 674 aaPredicted RBP12.19□□□□□ -0.46
VMP1-206ENST00000587945 PRSS23O95084 383 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms