RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 QDPRP09417 244 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 LHX2P50458 406 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 ROM1Q03395 351 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 HNRNPA0Q13151 305 aaKnown RBP17.64■□□□□ 0.41
TRIM47-204ENST00000587339 ZNF846Q147U1 533 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 SLC25A47Q6Q0C1 308 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 KRT77Q7Z794 578 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 OR10H5Q8NGA6 315 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 BORCS5Q969J3 196 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 OR2M2Q96R28 347 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 WDR12Q9GZL7 423 aaKnown RBP17.64■□□□□ 0.41
TRIM47-204ENST00000587339 SEC61A2Q9H9S3 476 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 ELOVL3Q9HB03 270 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 QPCTLQ9NXS2 382 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 CRNNQ9UBG3 495 aaPredicted RBP17.64■□□□□ 0.41
TRIM47-204ENST00000587339 KLK13Q9UKR3 277 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 PEX16Q9Y5Y5 336 aa17.64■□□□□ 0.41
TRIM47-204ENST00000587339 SMIM30A4D0T7 59 aa17.63■□□□□ 0.41
TRIM47-204ENST00000587339 ZFPL1O95159 310 aa17.63■□□□□ 0.41
TRIM47-204ENST00000587339 ALKBH1Q13686 389 aaKnown RBP17.63■□□□□ 0.41
TRIM47-204ENST00000587339 LRFN4Q6PJG9 635 aa17.63■□□□□ 0.41
TRIM47-204ENST00000587339 OR6N1Q8NGY5 312 aa17.63■□□□□ 0.41
TRIM47-204ENST00000587339 OR52N5Q8NH56 324 aa17.63■□□□□ 0.41
TRIM47-204ENST00000587339 C11orf40Q8WZ69 217 aa17.63■□□□□ 0.41
TRIM47-204ENST00000587339 ROBO4Q8WZ75 1007 aa17.63■□□□□ 0.41
TRIM47-204ENST00000587339 GLTPQ9NZD2 209 aa17.63■□□□□ 0.41
TRIM47-204ENST00000587339 CSAG2Q9Y5P2 127 aa17.63■□□□□ 0.41
TRIM47-204ENST00000587339 SHISA3A0PJX4 238 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 ACOT7O00154 380 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 BMP4P12644 408 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 CSNK1A1P48729 337 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 FOXC1Q12948 553 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 FAM27D1Q5T7N8 215 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 IGFL2Q6UWQ7 119 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 DCXRQ7Z4W1 244 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 LINC00346Q8IVM7 164 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 FAM109AQ8N4B1 249 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 ZIC4Q8N9L1 334 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 PPIL3Q9H2H8 161 aaKnown RBP17.62■□□□□ 0.41
TRIM47-204ENST00000587339 FRRS1LQ9P0K9 344 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 ZNF281Q9Y2X9 895 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 KCNMB2Q9Y691 235 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 J3QRK9 145 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 KLK10O43240 276 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 MTNR1BP49286 362 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 RPS11P62280 158 aaKnown RBP eCLIP17.62■□□□□ 0.41
TRIM47-204ENST00000587339 SRYQ05066 204 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 SLC10A1Q14973 349 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 INAQ16352 499 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 YIF1BQ5BJH7 314 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 ZMAT1Q5H9K5 638 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 PAMR1Q6UXH9 720 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 SPATC1Q76KD6 591 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 TRILQ7L0X0 811 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 OR5AK2Q8NH90 309 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 PNPLA2Q96AD5 504 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 ZNF845Q96IR2 970 aaPredicted RBP17.62■□□□□ 0.41
TRIM47-204ENST00000587339 ACKR4Q9NPB9 350 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 LOC400499M0QZD8 3231 aa17.62■□□□□ 0.41
TRIM47-204ENST00000587339 ZFHX4Q86UP3 3567 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 IQCMA0A1B0GVH7 501 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 ZNF716A6NP11 495 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 EFSO43281 561 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 ZNF432O94892 652 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 ZNF708P17019 499 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 MYL9P24844 172 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 SELENOPP49908 381 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 CLDN18P56856 261 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 ABLIM2Q6H8Q1 611 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 OR7E24Q6IFN5 339 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 TMEM123Q8N131 208 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 OR2G2Q8NGZ5 317 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 ST7LQ8TDW4 575 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 TMEM54Q969K7 222 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 SMURF1Q9HCE7 757 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 PLEKHB1Q9UF11 243 aaPredicted RBP17.61■□□□□ 0.41
TRIM47-204ENST00000587339 FLVCR1Q9Y5Y0 555 aa17.61■□□□□ 0.41
TRIM47-204ENST00000587339 CTDSP2O14595 271 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 RGS5O15539 181 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 GATBO75879 557 aaKnown RBP17.6■□□□□ 0.41
TRIM47-204ENST00000587339 CDAP32320 146 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 RIDAP52758 137 aaKnown RBP17.6■□□□□ 0.41
TRIM47-204ENST00000587339 CAV3P56539 151 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 CORO6Q6QEF8 472 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 FCRLAQ7L513 359 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 CROCCP3Q8IVE0 287 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 MFSD4AQ8N468 514 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 MEIOBQ8N635 442 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 RNF128Q8TEB7 428 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 AP3S1Q92572 193 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 ABTB1Q969K4 478 aaPredicted RBP17.6■□□□□ 0.41
TRIM47-204ENST00000587339 ZNF775Q96BV0 537 aaPredicted RBP17.6■□□□□ 0.41
TRIM47-204ENST00000587339 MAP6Q96JE9 813 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 OR14A2Q96R54 314 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 CYB5R1Q9UHQ9 305 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 LRP12Q9Y561 859 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 CFAP47Q6ZTR5 3102 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 KIAA1549Q9HCM3 1950 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 ARL6IP5O75915 188 aa17.6■□□□□ 0.41
TRIM47-204ENST00000587339 WNT11O96014 354 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms