RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 NPHS2Q9NP85 383 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 EIF3KQ9UBQ5 218 aaKnown RBP16.44■□□□□ 0.22
TRAF4-216ENST00000586813 RIMS3Q9UJD0 308 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 BAG5Q9UL15 447 aa16.44■□□□□ 0.22
TRAF4-216ENST00000586813 ARHGAP32A7KAX9 2087 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 LOC100509620A0A075B734 347 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 TMEM89A2RUT3 159 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 ZSCAN5BA6NJL1 495 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 FBP2O00757 339 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 NR2C1P13056 603 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 ADRA2CP18825 462 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 GDI2P50395 445 aaKnown RBP16.43■□□□□ 0.22
TRAF4-216ENST00000586813 ERVK-25P63136 954 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 PSG4Q00888 419 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 SGCAQ16586 387 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 THEM4Q5T1C6 240 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 DCAF12L2Q5VW00 463 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 MBNL2Q5VZF2 373 aaKnown RBP16.43■□□□□ 0.22
TRAF4-216ENST00000586813 UNQ6126/PRO20091Q6UXV3 157 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 RFPL4BQ6ZWI9 263 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 CALHM3Q86XJ0 350 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 AKR7LQ8NHP1 331 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 SLC25A40Q8TBP6 338 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 CCL17Q92583 94 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 GCDHQ92947 438 aaPredicted RBP16.43■□□□□ 0.22
TRAF4-216ENST00000586813 GAL3ST1Q99999 423 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 RBM4Q9BWF3 364 aaKnown RBP16.43■□□□□ 0.22
TRAF4-216ENST00000586813 TXNIPQ9H3M7 391 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 MED31Q9Y3C7 131 aa16.43■□□□□ 0.22
TRAF4-216ENST00000586813 PLSCR5A0PG75 271 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 GMNCA6NCL1 334 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 THRBP10828 461 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 TOP3AQ13472 1001 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-216ENST00000586813 CYLC2Q14093 348 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-216ENST00000586813 LAPTM4AQ15012 233 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 ALG10Q5BKT4 473 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 FAM27BQ5VT28 67 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 SLC25A47Q6Q0C1 308 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 C3orf56Q8N813 242 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 NANPQ8TBE9 248 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 KLF14Q8TD94 323 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-216ENST00000586813 ZMYND19Q96E35 227 aaPredicted RBP16.42■□□□□ 0.22
TRAF4-216ENST00000586813 SLC6A7Q99884 636 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 SH3GL1Q99961 368 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 SIKE1Q9BRV8 207 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 SUCNR1Q9BXA5 334 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 OR2J1Q9GZK6 312 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 HIF3AQ9Y2N7 669 aa16.42■□□□□ 0.22
TRAF4-216ENST00000586813 A0A0G2JND7 137 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 FXYD1O00168 92 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 PIP5K1CO60331 668 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 ICMTO60725 284 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 EDF1O60869 148 aaKnown RBP16.41■□□□□ 0.22
TRAF4-216ENST00000586813 UBOX5O94941 541 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 GATA3P23771 443 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 OR1E2P47887 323 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 LIMS1P48059 325 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 ZNF771Q7L3S4 317 aaPredicted RBP16.41■□□□□ 0.22
TRAF4-216ENST00000586813 C1orf174Q8IYL3 243 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 CLDN22Q8N7P3 220 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 OR8J3Q8NGG0 315 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 ABHD4Q8TB40 342 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 ECSITQ9BQ95 431 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 ALG12Q9BV10 488 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 OR2H1Q9GZK4 316 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 EGLN1Q9GZT9 426 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 WNT5BQ9H1J7 359 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 CYSLTR2Q9NS75 346 aa16.41■□□□□ 0.22
TRAF4-216ENST00000586813 CGGBP1Q9UFW8 167 aaPredicted RBP16.41■□□□□ 0.22
TRAF4-216ENST00000586813 ISPDA4D126 451 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 H3BSA7 217 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 SPRY1O43609 319 aaPredicted RBP16.4■□□□□ 0.22
TRAF4-216ENST00000586813 IGHMP01871 453 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 ADH4P08319 380 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 LAP3P28838 519 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 LIPAP38571 399 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 PPP1CBP62140 327 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 SLC3A1Q07837 685 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 TAF11Q15544 211 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 METTL21CQ5VZV1 264 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 BPIFB2Q8N4F0 458 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 LRRC58Q96CX6 371 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 OPN4Q9UHM6 478 aa16.4■□□□□ 0.22
TRAF4-216ENST00000586813 HMGB1P1B2RPK0 211 aaPredicted RBP16.39■□□□□ 0.21
TRAF4-216ENST00000586813 NGFP01138 241 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 FSHBP01225 129 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 IFNA14P01570 189 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 CST2P09228 141 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 RPL27P61353 136 aaKnown RBP16.39■□□□□ 0.21
TRAF4-216ENST00000586813 LCN2P80188 198 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 ERICH5Q6P6B1 374 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 ALDH16A1Q8IZ83 802 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 FNDC8Q8TC99 324 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 GEMIN6Q8WXD5 167 aaKnown RBP16.39■□□□□ 0.21
TRAF4-216ENST00000586813 BPIFA2Q96DR5 249 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 C7orf69Q9H7B7 122 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 ESM1Q9NQ30 184 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 UBAP1Q9NZ09 502 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 ZDHHC8Q9ULC8 765 aa16.39■□□□□ 0.21
TRAF4-216ENST00000586813 CD55P08174 381 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms