RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 PTGES3Q15185 160 aaKnown RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 HIST3H3Q16695 136 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 CEACAM16Q2WEN9 425 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 GPR107Q5VW38 600 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 SHEQ5VZ18 495 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 C11orf71Q6IPW1 123 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 LAIR2Q6ISS4 152 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 ALKBH2Q6NS38 261 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 PGBD2Q6P3X8 592 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 KLHL17Q6TDP4 642 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 PRSS57Q6UWY2 283 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 B3GLCTQ6Y288 498 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 SLC35D2Q76EJ3 337 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 RRM2BQ7LG56 351 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 GPR137CQ8N3F9 429 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 WFDC11Q8NEX6 87 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 OR4K5Q8NGD3 323 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 OR6X1Q8NH79 312 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 PFN4Q8NHR9 129 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 SLC7A13Q8TCU3 470 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 C12orf43Q96C57 262 aaKnown RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 TXNDC15Q96J42 360 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 FUZQ9BT04 418 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 COPS4Q9BT78 406 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 TRAF4Q9BUZ4 470 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 EMC6Q9BV81 110 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 CRLF2Q9HC73 371 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 MOV10Q9HCE1 1003 aaKnown RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 CLN6Q9NWW5 311 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 CNOT2Q9NZN8 540 aaKnown RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 RHCGQ9UBD6 479 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 PSORS1C1Q9UIG5 152 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 ZANQ9Y493 2812 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 NSD1Q96L73 2696 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 YLPM1P49750 1951 aaKnown RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 IGHV1-18A0A0C4DH31 117 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 IRGMA1A4Y4 181 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 TRIM64BA6NI03 449 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 SNTNA6NMZ2 147 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 CENPBD1B2RD01 187 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 C11orf98E9PRG8 122 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 H3BMQ9 156 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 H3BN98 237 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 M0R1B8 84 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 SLC22A1O15245 554 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 PIP5K1CO60331 668 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 SMPD2O60906 423 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 WBP4O75554 376 aaKnown RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 KRT33AO76009 404 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 OR7A10O76100 309 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 WNT11O96014 354 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 MT-ND2P03891 347 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 PGA4P0DJD7 388 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 PGA3P0DJD8 388 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 PIPP12273 146 aaPredicted RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 IFNGR1P15260 489 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 PCMT1P22061 227 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 PTH2RP49190 550 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 ZNF133P52736 654 aaPredicted RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 CDH11P55287 796 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 SNRPGP62308 76 aaKnown RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 NKX6-1P78426 367 aaPredicted RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 ARF1P84077 181 aaKnown RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 EMX1Q04741 257 aaPredicted RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 FHL1Q13642 323 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 Q5PR19 223 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 SYT6Q5T7P8 510 aaPredicted RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 MEDAGQ5VYS4 303 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 SLX4IPQ5VYV7 408 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 C1orf94Q6P1W5 598 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 KLHL24Q6TFL4 600 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 PTCHD4Q6ZW05 846 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 AHSA2Q719I0 299 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 NANOGNBQ7Z5D8 188 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 C10orf53Q8N6V4 93 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 OR8J1Q8NGP2 316 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 TEX47Q8TBZ9 253 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 GNPDA2Q8TDQ7 276 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 SMAP2Q8WU79 429 aaPredicted RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 TMEM171Q8WVE6 324 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 APH1BQ8WW43 257 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 ACOT11Q8WXI4 607 aaPredicted RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 TMEM54Q969K7 222 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 SLC25A44Q96H78 314 aaPredicted RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 COG8Q96MW5 612 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 ZNF75AQ96N20 296 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 KATNB1Q9BVA0 655 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 MRPL13Q9BYD1 178 aaKnown RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 RACGAP1Q9H0H5 632 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 FKBP14Q9NWM8 211 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 PAK1IP1Q9NWT1 392 aaPredicted RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 ZNF224Q9NZL3 707 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 ENPP5Q9UJA9 477 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 HIF3AQ9Y2N7 669 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 MED31Q9Y3C7 131 aa7.52□□□□□ -1.21
ATG4D-202ENST00000585437 ANK3Q12955 4377 aaKnown RBP7.52□□□□□ -1.21
ATG4D-202ENST00000585437 USF3Q68DE3 2245 aa7.51□□□□□ -1.21
ATG4D-202ENST00000585437 NIPBLQ6KC79 2804 aaeCLIP7.51□□□□□ -1.21
ATG4D-202ENST00000585437 A0A087WUU8 490 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms