RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, human

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-223	ENST00000584472	APOL4	Q9BPW4	351 aa		14	□□□□□ -0.17
CSNK1D-223	ENST00000584472	HCAR1	Q9BXC0	346 aa		14	□□□□□ -0.17
CSNK1D-223	ENST00000584472	CXXC4	Q9H2H0	198 aa		14	□□□□□ -0.17
CSNK1D-223	ENST00000584472	CLEC4M	Q9H2X3	399 aa	Predicted RBP	14	□□□□□ -0.17
CSNK1D-223	ENST00000584472	MED20	Q9H944	212 aa		14	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SRA1	Q9HD15	236 aa	Known RBP	14	□□□□□ -0.17
CSNK1D-223	ENST00000584472	B9D1	Q9UPM9	204 aa		14	□□□□□ -0.17
CSNK1D-223	ENST00000584472	IGLV1-36	A0A0B4J1U3	117 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	DEFB108A	A8MXU0	73 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	KHDRBS3	O75525	346 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	HRG	P04196	525 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ITGA5	P08648	1049 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	GNAO1	P09471	354 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	CLU	P10909	449 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SNRPG	P62308	76 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	TSC22D1	Q15714	1073 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ETFDH	Q16134	617 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	TIMM23B	Q5SRD1	257 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	USP51	Q70EK9	711 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ENTHD1	Q8IYW4	607 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	OR2T4	Q8NH00	348 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	OTULIN	Q96BN8	352 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	FOXC2	Q99958	501 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	RACGAP1	Q9H0H5	632 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	RERGL	Q9H628	205 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	NGB	Q9NPG2	151 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	RAB26	Q9ULW5	256 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	UGT2A1	Q9Y4X1	527 aa		13.99	□□□□□ -0.17
CSNK1D-223	ENST00000584472	PRR14L	Q5THK1	2151 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	CIB4	A0PJX0	185 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	OR5H1	A6NKK0	313 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ZNF99	A8MXY4	864 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	MPZL2	O60487	215 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	GYPB	P06028	91 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SPI1	P17947	270 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	GABRB1	P18505	474 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ZNF84	P51523	738 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SH3BGR	P55822	239 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ISL1	P61371	349 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	TAB1	Q15750	504 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	BEX5	Q5H9J7	111 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	C9orf135	Q5VTT2	229 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	AADACL4	Q5VUY2	407 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	NXNL2	Q5VZ03	156 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	C17orf78	Q8N4C9	275 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SETD9	Q8NE22	299 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	BBS1	Q8NFJ9	593 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	RHOXF1	Q8NHV9	184 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ZNRF4	Q8WWF5	429 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	MUCL1	Q96DR8	90 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	BOD1	Q96IK1	185 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	OR51V1	Q9H2C8	321 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	COA3	Q9Y2R0	106 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	HSPE1-MOB4	S4R3N1	261 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ROS1	P08922	2347 aa		13.98	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ITPR3	Q14573	2671 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SIAH2	O43255	324 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	PRODH	O43272	600 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	RAD51D	O75771	328 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SLC2A5	P22732	501 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	PYCR1	P32322	319 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	NR1H2	P55055	460 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	RIPPLY3	P57055	190 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ARF1	P84077	181 aa	Known RBP	13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	IL5RA	Q01344	420 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	GABRA6	Q16445	453 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SLC25A30	Q5SVS4	291 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	LINC01590	Q5TEZ4	76 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	FOXL2NB	Q6ZUU3	175 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ZNF627	Q7L945	461 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	CDC20B	Q86Y33	519 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	WFDC8	Q8IUA0	241 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	GLB1L2	Q8IW92	636 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	PROKR2	Q8NFJ6	384 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	OR51L1	Q8NGJ5	315 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	MBD6	Q96DN6	1003 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	FOXB1	Q99853	325 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ANKRD60	Q9BZ19	345 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	TMEM38B	Q9NVV0	291 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	AASS	Q9UDR5	926 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ST6GALNAC2	Q9UJ37	374 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ITGB1BP2	Q9UKP3	347 aa		13.97	□□□□□ -0.17
CSNK1D-223	ENST00000584472		A0A1W2PPL8	197 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	FAM171A2	A8MVW0	826 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SEC14L2	O76054	403 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	GLCE	O94923	617 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	GPANK1	O95872	356 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	LAP3	P28838	519 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	CDA	P32320	146 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	GLO1	Q04760	184 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	PPA1	Q15181	289 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	OCLN	Q16625	522 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	KLHL12	Q53G59	568 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SLC35D3	Q5M8T2	416 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	SEZ6L2	Q6UXD5	910 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	OR1K1	Q8NGR3	316 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms