RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 ABHD3Q8WU67 409 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 DEDD2Q8WXF8 326 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 GALNT14Q96FL9 552 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 DNAJC1Q96KC8 554 aaKnown RBP2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 PKNOX2Q96KN3 472 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNF681Q96N22 645 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 SERPINB12Q96P63 405 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 ATP5SQ99766 215 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 UBE2ZQ9H832 354 aaPredicted RBP2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNRD1Q9P1U0 126 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 UXTQ9UBK9 157 aaPredicted RBP2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 TMED5Q9Y3A6 229 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 KCNE3Q9Y6H6 103 aa2.3□□□□□ -2.04
PPP4R1-227ENST00000583988 COL22A1Q8NFW1 1626 aaPredicted RBP2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 ADAMTS13Q76LX8 1427 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 A0A1W2PP18 115 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 CCDC169A6NNP5 214 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 LRRIQ3A6PVS8 624 aaPredicted RBP2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 ENTPD5O75356 428 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 RP2O75695 350 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 GABARAPO95166 117 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 FABP3P05413 133 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 PRPS2P11908 318 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 CEACAM6P40199 344 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 PMELP40967 661 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 CDKN1BP46527 198 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 ACLYP53396 1101 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 ESRRGP62508 458 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 ACTA2P62736 377 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 RAP1AP62834 184 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 ACTC1P68032 377 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 QPRTQ15274 297 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 XKR7Q5GH72 579 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 RAET1LQ5VY80 246 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 Q5W150 140 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 ANKRD26P1Q6NSI1 321 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 Q6ZSR3 168 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 FRZBQ92765 325 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 CENPKQ9BS16 269 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 SLC25A2Q9BXI2 301 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 SYNDIG1Q9H7V2 258 aa2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNF430Q9H8G1 570 aaPredicted RBP2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 FGF20Q9NP95 211 aaPredicted RBP2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 YTHDF2Q9Y5A9 579 aaKnown RBP2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 MRPS18BQ9Y676 258 aaKnown RBP2.29□□□□□ -2.04
PPP4R1-227ENST00000583988 GPATCH8Q9UKJ3 1502 aaKnown RBP2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 CNTNAP1P78357 1384 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 SMCO3A2RU48 225 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 F6UB75 175 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 SPECC1L-ADORA2AF8WAN1 911 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 NDUFAB1O14561 156 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 AIM2O14862 343 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 PPP1R2P9O14990 202 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 CIB2O75838 187 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 CLPXO76031 633 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 CLIC3O95833 236 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 IGHDP01880 384 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 BCHEP06276 602 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 UQCRFS1P1P0C7P4 283 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 GPX4P36969 197 aaPredicted RBP2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 TMED10P49755 219 aaKnown RBP2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 VSX2P58304 361 aaPredicted RBP2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 MXD1Q05195 221 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 IRF4Q15306 451 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 LY6G6FQ5SQ64 297 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 FBXW9Q5XUX1 488 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 SPECC1LQ69YQ0 1117 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 ARL9Q6T311 187 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 Q6ZR03 302 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 PRSS58Q8IYP2 241 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 ARRDC1Q8N5I2 433 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 OR2A1Q8NGT9 310 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 RAB3IL1Q8TBN0 382 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 ACMSDQ8TDX5 336 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 ELMO1Q92556 727 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 SLC38A4Q969I6 547 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 TM4SF18Q96CE8 201 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 TGS1Q96RS0 853 aaKnown RBP2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 SAMSN1Q9NSI8 373 aaKnown RBP2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 ZNF355PQ9NSJ1 428 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 DDX19AQ9NUU7 478 aaKnown RBP2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 CTSFQ9UBX1 484 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 OPN4Q9UHM6 478 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 LGALS13Q9UHV8 139 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 LSM7Q9UK45 103 aaKnown RBP2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 RFNGQ9Y644 331 aa2.28□□□□□ -2.04
PPP4R1-227ENST00000583988 IGSF9BQ9UPX0 1349 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 GLYATL1P3A0A0U1RQE8 302 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 ZNF816-ZNF321PA0A0X1KG74 233 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 CIB4A0PJX0 185 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 GOLGA8OA6NCC3 632 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 FAM47DPA6NHR8 397 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 ZNF705GA8MUZ8 300 aaPredicted RBP2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 C9JVG2 144 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 GOLGA8NF8WBI6 632 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 SIRPB1O00241 398 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 RAB29O14966 203 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 CLOCKO15516 846 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 KLHL41O60662 606 aa2.27□□□□□ -2.05
PPP4R1-227ENST00000583988 VAMP5O95183 116 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms