RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PLGLB1Q02325 96 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 GFOD2Q3B7J2 385 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 SOWAHCQ53LP3 525 aaPredicted RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 DCAF12Q5T6F0 453 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 OR7E24Q6IFN5 339 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 BCDIN3DQ7Z5W3 292 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 CMTM4Q8IZR5 234 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 SPERTQ8NA61 448 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 SMRP1Q8NCR6 262 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 OR4D9Q8NGE8 314 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 PPP1R35Q8TAP8 253 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 NKD1Q969G9 470 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 RASD2Q96D21 266 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 RAB3CQ96E17 227 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 SLC25A31Q9H0C2 315 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 SLC25A18Q9H1K4 315 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 NELFAQ9H3P2 528 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 ZNF286AQ9HBT8 521 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 C12orf4Q9NQ89 552 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 A0A0B4J2A0 478 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 IDSB3KWA1 339 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 GOSR2O14653 212 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 XRCC2O43543 280 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 GPR137BO60478 399 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 IFNA1P01562 189 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 EIF4EP06730 217 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 FCGR2AP12318 317 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 COL9A1P20849 921 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 ZNF93P35789 620 aaPredicted RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 SEC61A1P61619 476 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 LCN6P62502 163 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 IL13RA1P78552 427 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 MAT1AQ00266 395 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 FCRLBQ6BAA4 426 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 UNQ9370/PRO34162Q6UXP9 181 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 IDO2Q6ZQW0 420 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 CMTM1Q8IZ96 169 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 GTPBP8Q8N3Z3 284 aaPredicted RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 CSNK2A3Q8NEV1 391 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 BBS1Q8NFJ9 593 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 FNDC9Q8TBE3 224 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 SPSB1Q96BD6 273 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 LRRC3BQ96PB8 259 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 DHRS9Q9BPW9 319 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 MENTQ9BUN1 341 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 DUSP15Q9H1R2 295 aaPredicted RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 PLK3Q9H4B4 646 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 SHPKQ9UHJ6 478 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 FARSAQ9Y285 508 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 MRPS28Q9Y2Q9 187 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 SF3B6Q9Y3B4 125 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 LOC107986453A0A1B0GWG9 222 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 RNF212BA8MTL3 300 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 H3BQ06 376 aaPredicted RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 GP1BAP07359 652 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 CLUP10909 449 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 DPP4P27487 766 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 LSM6P62312 80 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 SKP2Q13309 424 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 MFAP5Q13361 173 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 EBPQ15125 230 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 SLC36A2Q495M3 483 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 WDR5BQ86VZ2 330 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 GABRG1Q8N1C3 465 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 EXD3Q8N9H8 876 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 ZNF511Q8NB15 262 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 OR51T1Q8NGJ9 327 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 EMG1Q92979 244 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 JSRP1Q96MG2 331 aaPredicted RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 ZNF426Q9BUY5 554 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 PIGMQ9H3S5 423 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 YBX2Q9Y2T7 364 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 SIT1Q9Y3P8 196 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 RBM7Q9Y580 266 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 NYNRINQ9P2P1 1898 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 ANKRD20A5PA0PJZ0 165 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 H7C2Y5 167 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 DDAH2O95865 285 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 PLGP00747 810 aaPredicted RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 IGHMP01871 453 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 DLSTP36957 453 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 GAB4Q2WGN9 574 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 C1orf189Q5VU69 101 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 UQCC3Q6UW78 93 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 TSEN54Q7Z6J9 526 aaKnown RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 MARCH3Q86UD3 253 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 COMMD1Q8N668 190 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 AMER3Q8N944 861 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 SLAMF9Q96A28 289 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 SPACA9Q96E40 222 aaPredicted RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 ZNF285Q96NJ3 590 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 METTL17Q9H7H0 456 aaPredicted RBP5.3□□□□□ -1.56
RTTN-209ENST00000583043 TAS2R3Q9NYW6 316 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 CHST2Q9Y4C5 530 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 A0A1W2PPK0 400 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 TOR1AO14656 332 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 MYOGP15173 224 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 ENPP1P22413 925 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 ITGB8P26012 769 aa5.3□□□□□ -1.56
RTTN-209ENST00000583043 ACAA2P42765 397 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms