RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 LNX2Q8N448 690 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 NPEPL1Q8NDH3 523 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 CPEB3Q8NE35 698 aaKnown RBP10.91□□□□□ -0.66
SNORD55-201ENST00000581525 FANK1Q8TC84 345 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 NSMAFQ92636 917 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 UTP4Q969X6 686 aaKnown RBP10.91□□□□□ -0.66
SNORD55-201ENST00000581525 RASD2Q96D21 266 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 NRBF2Q96F24 287 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 ERMAPQ96PL5 475 aaPredicted RBP10.91□□□□□ -0.66
SNORD55-201ENST00000581525 DOK1Q99704 481 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 KCNS3Q9BQ31 491 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 YY1AP1Q9H869 796 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 NTN4Q9HB63 628 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 DNAJB9Q9UBS3 223 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 TIMM10BQ9Y5J6 103 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 CDH10Q9Y6N8 788 aa10.91□□□□□ -0.66
SNORD55-201ENST00000581525 IGLV1-36A0A0B4J1U3 117 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 FKBP6O75344 327 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 KHDRBS3O75525 346 aaKnown RBP10.9□□□□□ -0.66
SNORD55-201ENST00000581525 PPP1R3DO95685 299 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 COX5BP10606 129 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 HIST1H1CP16403 213 aaKnown RBP10.9□□□□□ -0.66
SNORD55-201ENST00000581525 ZNF32P17041 273 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 MSR1P21757 451 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 CRABP1P29762 137 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 THBS4P35443 961 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 GUCA1AP43080 201 aaPredicted RBP10.9□□□□□ -0.66
SNORD55-201ENST00000581525 PCBD1P61457 104 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 HIST1H3AP68431 136 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 PSG4Q00888 419 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 NPRL3Q12980 569 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 DAG1Q14118 895 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 SGCAQ16586 387 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 HIST2H3PS2Q5TEC6 136 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 HIST2H3AQ71DI3 136 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 SPATA24Q86W54 205 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 GLB1L2Q8IW92 636 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 LRRC18Q8N456 261 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 OR8D4Q8NGM9 314 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 OR1J2Q8NGS2 313 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 GIPC3Q8TF64 312 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 HTRA1Q92743 480 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 POM121L2Q96KW2 1035 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 NUAK2Q9H093 628 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 RACGAP1Q9H0H5 632 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 WNT5BQ9H1J7 359 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 SYT4Q9H2B2 425 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 KCNN2Q9H2S1 579 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 ARMC1Q9NVT9 282 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 REV1Q9UBZ9 1251 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 B9D1Q9UPM9 204 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 BAIAP2Q9UQB8 552 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 SPEF1Q9Y4P9 236 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 FKBP7Q9Y680 259 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 U3KQV3 271 aa10.9□□□□□ -0.66
SNORD55-201ENST00000581525 VSTM5A8MXK1 200 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 H7C1C5 153 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 DCTN6O00399 190 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 SOCS2O14508 198 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 SLC16A7O60669 478 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 IGHV4-39P01824 125 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 IGFBP1P08833 259 aaPredicted RBP10.89□□□□□ -0.67
SNORD55-201ENST00000581525 OR4A8P0C604 315 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 BMP4P12644 408 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 CD99P14209 185 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 CDKN1AP38936 164 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 ATP5J2P56134 94 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 LCN6P62502 163 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 MSMPQ1L6U9 139 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 PABPC1L2AQ5JQF8 200 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 Q5PR19 223 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 YTHDF3Q7Z739 585 aaKnown RBP10.89□□□□□ -0.67
SNORD55-201ENST00000581525 C1orf174Q8IYL3 243 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 OR6V1Q8N148 313 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 AQP11Q8NBQ7 271 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 SLC30A7Q8NEW0 376 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 OR10G2Q8NGC3 310 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 PERPQ96FX8 193 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 FEVQ99581 238 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 NIPSNAP1Q9BPW8 284 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 ZNF416Q9BWM5 594 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 CACNG6Q9BXT2 260 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 PLA2G12AQ9BZM1 189 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 OR2H1Q9GZK4 316 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 EGLN3Q9H6Z9 239 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 RNF121Q9H920 327 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 BARX1Q9HBU1 254 aaPredicted RBP10.89□□□□□ -0.67
SNORD55-201ENST00000581525 COA3Q9Y2R0 106 aaPredicted RBP10.89□□□□□ -0.67
SNORD55-201ENST00000581525 PMF1-BGLAPU3KQ54 211 aa10.89□□□□□ -0.67
SNORD55-201ENST00000581525 LOC100509620A0A075B734 347 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 IQCMA0A1B0GVH7 501 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 OR6C68A6NDL8 312 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 C12orf71A8MTZ7 269 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 NDUFS7O75251 213 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 GAAP10253 952 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 ANXA8P13928 327 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 ZNF250P15622 560 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 PPOXP50336 477 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 UCP2P55851 309 aa10.88□□□□□ -0.67
SNORD55-201ENST00000581525 CBX1P83916 185 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms