RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 GLI4P10075 376 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 ENTPD1P49961 510 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 ADAM8P78325 824 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 PIGFQ07326 219 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 GALEQ14376 348 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 IRF3Q14653 427 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 NEDD8Q15843 81 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 TEX30Q5JUR7 227 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 SLC18B1Q6NT16 456 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 KCTD18Q6PI47 426 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 PLEKHG7Q6ZR37 379 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 SEM1Q6ZVN7 128 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 KCTD20Q7Z5Y7 419 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 GPR141Q7Z602 305 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 NANOGP1Q8N7R0 232 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF511Q8NB15 262 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 OR52N1Q8NH53 320 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF775Q96BV0 537 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 DMRTA2Q96SC8 542 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 RHNO1Q9BSD3 238 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 WACQ9BTA9 647 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 RBM24Q9BX46 236 aaKnown RBP12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 KCNN2Q9H2S1 579 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 ERVK13-1Q9NX77 482 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 FOXD3Q9UJU5 478 aaPredicted RBP12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 POLR1DQ9Y2S0 133 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 CACNA1CQ13936 2221 aa12.31□□□□□ -0.44
CSNK1D-209ENST00000578904 HSPB2A8KAH6 182 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 DCTN6O00399 190 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF593O00488 134 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 APOL3O95236 402 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 FARS2O95363 451 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 CNOT4O95628 575 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 AGTR1P30556 359 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 TIMP3P35625 211 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 NAA10P41227 235 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 WNT4P56705 351 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 LSM6P62312 80 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 FMODQ06828 376 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 PMPCAQ10713 525 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 MRPL28Q13084 256 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 SPHARQ15513 63 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 MED22Q15528 200 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 HSPB2Q16082 182 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 UBE2UQ5VVX9 321 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 MTFR2Q6P444 385 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 FAM214BQ7L5A3 538 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 FAM220AQ7Z4H9 259 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 TIGD4Q8IY51 512 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 GCNT2Q8N0V5 402 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 SLC26A10Q8NG04 563 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 OR2AJ1Q8NGZ0 328 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 SNX33Q8WV41 574 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 RND1Q92730 232 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 NMD3Q96D46 503 aaKnown RBP12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 ALG8Q9BVK2 526 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 NELFAQ9H3P2 528 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 ING1Q9UK53 422 aaPredicted RBP12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 SLC5A6Q9Y289 635 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 NAV2Q8IVL1 2488 aa12.3□□□□□ -0.44
CSNK1D-209ENST00000578904 FREM1Q5H8C1 2179 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 INTS1Q8N201 2190 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 TVP23AA6NH52 213 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 J3QRE1 110 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 SELENOFO60613 162 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 NOL3O60936 208 aaKnown RBP12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 MT-ND5P03915 603 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 TFAP2AP05549 437 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 SPARCP09486 303 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 TMIGD3P0DMS9 266 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 MSR1P21757 451 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 PCMT1P22061 227 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 PSMB9P28065 219 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 SH3BGRP55822 239 aaPredicted RBP12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 TAS2R43P59537 309 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 EGR3Q06889 387 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 ETFDHQ16134 617 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 KCNMB1Q16558 191 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 NRN1LQ496H8 165 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 ZNF544Q6NX49 715 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 LRFN4Q6PJG9 635 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 LHFPL3Q86UP9 236 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 CDC20BQ86Y33 519 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 SYS1Q8N2H4 156 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 UBE2J2Q8N2K1 259 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 OR6K3Q8NGY3 331 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 OTOSQ8NHW6 89 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 SGCDQ92629 289 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 CCDC120Q96HB5 630 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 TBX5Q99593 518 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 CRLF2Q9HC73 371 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 ISYNA1Q9NPH2 558 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 CLEC4AQ9UMR7 237 aa12.29□□□□□ -0.44
CSNK1D-209ENST00000578904 SMIM31A0A1B0GVY4 71 aa12.28□□□□□ -0.44
CSNK1D-209ENST00000578904 A0A1W2PQL4 384 aaPredicted RBP12.28□□□□□ -0.44
CSNK1D-209ENST00000578904 RPL36A-HNRNPH2H7BZ11 118 aa12.28□□□□□ -0.44
CSNK1D-209ENST00000578904 TOXO94900 526 aa12.28□□□□□ -0.44
CSNK1D-209ENST00000578904 KRT8P05787 483 aa12.28□□□□□ -0.44
CSNK1D-209ENST00000578904 MAP2K4P45985 399 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms