RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 LAP3P28838 519 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 CHRNB4P30926 498 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 SH3BGRP55822 239 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 LSM6P62312 80 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 MRPS34P82930 218 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 HSF2Q03933 536 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 SLC25A35Q3KQZ1 300 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 C6orf141Q5SZD1 244 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 PLBD1Q6P4A8 553 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 EGFL6Q8IUX8 553 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 GLB1L2Q8IW92 636 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 GPR137CQ8N3F9 429 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 CNEP1R1Q8N9A8 125 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 ZNF610Q8N9Z0 462 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 SYT14Q8NB59 555 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 CYB561A3Q8NBI2 242 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 C1orf162Q8NEQ5 155 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 OR6N1Q8NGY5 312 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 ZNRF4Q8WWF5 429 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 NINJ1Q92982 152 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 KISS1RQ969F8 398 aaPredicted RBP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 IL4I1Q96RQ9 567 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 USB1Q9BQ65 265 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 HDHD5Q9BXW7 423 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 CRLF2Q9HC73 371 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 RPRD1BQ9NQG5 326 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 CLN6Q9NWW5 311 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 WARS2Q9UGM6 360 aaKnown RBP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 PRSS50Q9UI38 385 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 PROCRQ9UNN8 238 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 GPR52Q9Y2T5 361 aa9.78□□□□□ -0.84
CDK5RAP3-204ENST00000577664 CCDC182A6NF36 153 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 TRIM64A6NGJ6 449 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 FAM183AA6NL82 134 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ZNF99A8MXY4 864 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 J3QRE1 110 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ENTPD6O75354 484 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 CCDC159P0C7I6 412 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 GAAP10253 952 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 CLUP10909 449 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 PSMB1P20618 241 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 PAX7P23759 505 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 IL5RAQ01344 420 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ROR2Q01974 943 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 GLO1Q04760 184 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 LGALS3BPQ08380 585 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 MED21Q13503 144 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ETFDHQ16134 617 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 FAM27BQ5VT28 67 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ZNF474Q6S9Z5 364 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 RHOUQ7L0Q8 258 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 SYT9Q86SS6 491 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 CCDC36Q8IYA8 594 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 SLC26A10Q8NG04 563 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 NABP1Q96AH0 204 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ZNF837Q96EG3 531 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 TSSK2Q96PF2 358 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ULBP2Q9BZM5 246 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 SIAEQ9HAT2 523 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 RASSF1Q9NS23 344 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 FKBP14Q9NWM8 211 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 TAS2R16Q9NYV7 291 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 UBAP1Q9NZ09 502 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 H2AFY2Q9P0M6 372 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 UPB1Q9UBR1 384 aa9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 EXOGQ9Y2C4 368 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ZNF587BE7ETH6 402 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 H7C1C5 153 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 TFP02787 698 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ITGA5P08648 1049 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 PIPP12273 146 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 IGHV1-2P23083 117 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 FMO3P31513 532 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ZNF84P51523 738 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 LCN6P62502 163 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 SIRPAP78324 504 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 TGFBR3Q03167 851 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 FMODQ06828 376 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 POU4F2Q12837 409 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 FAPQ12884 760 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 CEACAM16Q2WEN9 425 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 SFRP5Q5T4F7 317 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 CARD17Q5XLA6 110 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 OR7E24Q6IFN5 339 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ANKRD16Q6P6B7 361 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 TIGD4Q8IY51 512 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 ZNF433Q8N7K0 673 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 RELL2Q8NC24 303 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 BBS1Q8NFJ9 593 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 BCL2L2Q92843 193 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 FOXB1Q99853 325 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 JAM3Q9BX67 310 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 NELFAQ9H3P2 528 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 C12orf49Q9H741 205 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 MED20Q9H944 212 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 TMEM38BQ9NVV0 291 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 COQ3Q9NZJ6 369 aa9.76□□□□□ -0.85
CDK5RAP3-204ENST00000577664 CNOT2Q9NZN8 540 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms