RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ALPLP05186 524 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 CD14P08571 375 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 OR8G3PP0DMU2 310 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 NR2C1P13056 603 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 CD99P14209 185 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF26P17031 533 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-216ENST00000575599 DAPP51397 102 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 LCN6P62502 163 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 PPP2R2BQ00005 443 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 COX10Q12887 443 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 FAM205BPQ63HN1 556 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF544Q6NX49 715 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 C1orf94Q6P1W5 598 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 FAHD1Q6P587 224 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 VHLLQ6RSH7 139 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 DTX2Q86UW9 622 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF555Q8NEP9 628 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF519Q8TB69 540 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 RDH12Q96NR8 316 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 ALG12Q9BV10 488 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 DGCR6LQ9BY27 220 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 CBLN4Q9NTU7 201 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF701Q9NV72 531 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-216ENST00000575599 B3GNT2Q9NY97 397 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 GRHPRQ9UBQ7 328 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 SIGLEC7Q9Y286 467 aa11.51□□□□□ -0.57
RPAIN-216ENST00000575599 USF3Q68DE3 2245 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 ARID1AO14497 2285 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF469Q96JG9 3925 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-216ENST00000575599 IGHV2OR16-5A0A0B4J2B6 119 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 A6NIZ1 184 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 H3BN98 237 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 NDUFB2O95178 105 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 PAX1P15863 534 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 CDAP32320 146 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 AQP4P55087 323 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 RAP1BP61224 184 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 RAB1AP62820 205 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 RAP1AP62834 184 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 TSPAN31Q12999 210 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 ZIK1Q3SY52 487 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-216ENST00000575599 C10orf128Q5T292 105 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 KDM4DQ6B0I6 523 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 SLC16A14Q7RTX9 510 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 ZER1Q7Z7L7 766 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 LRRC18Q8N456 261 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 FGFBP3Q8TAT2 258 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 FANK1Q8TC84 345 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 TRMT61AQ96FX7 289 aaKnown RBP11.5□□□□□ -0.57
RPAIN-216ENST00000575599 Q96M85 177 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 Q96MF0 132 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF570Q96NI8 536 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 RBP7Q96R05 134 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF184Q99676 751 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-216ENST00000575599 GPA33Q99795 319 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 CACNG6Q9BXT2 260 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 RIBC2Q9H4K1 309 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 Q9H521 79 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 RNF121Q9H920 327 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 CA10Q9NS85 328 aa11.5□□□□□ -0.57
RPAIN-216ENST00000575599 TEX13CA0A0J9YWL9 993 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 A0A1W2PPL8 197 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 OVOL3O00110 214 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 XKRYO14609 159 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 PTP4A3O75365 173 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF14P17017 642 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-216ENST00000575599 FPR3P25089 353 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 POU1F1P28069 291 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF133P52736 654 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-216ENST00000575599 KRR1Q13601 381 aaKnown RBP11.49□□□□□ -0.57
RPAIN-216ENST00000575599 RAB39AQ14964 217 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 SLC36A2Q495M3 483 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 MESTQ5EB52 335 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 THEM4Q5T1C6 240 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 C11orf71Q6IPW1 123 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 ZNF770Q6IQ21 691 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-216ENST00000575599 DHRSXQ8N5I4 330 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 ARIH2OSQ8N7S6 290 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 CYGBQ8WWM9 190 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 RASD2Q96D21 266 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 NMD3Q96D46 503 aaKnown RBP11.49□□□□□ -0.57
RPAIN-216ENST00000575599 FBXO17Q96EF6 278 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 NIPSNAP1Q9BPW8 284 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 TEX12Q9BXU0 123 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 UGT2A1Q9Y4X1 527 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 PLCE1Q9P212 2302 aa11.49□□□□□ -0.57
RPAIN-216ENST00000575599 MITFO75030 526 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-216ENST00000575599 NDUFS7O75251 213 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 OSMP13725 252 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 FXYD6P3P58550 94 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 HGFACQ04756 655 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 SNTB2Q13425 540 aaKnown RBP11.48□□□□□ -0.57
RPAIN-216ENST00000575599 SGCAQ16586 387 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 NRN1LQ496H8 165 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 KRT80Q6KB66 452 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 TMEM53Q6P2H8 277 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 SLC25A47Q6Q0C1 308 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 SMARCD3Q6STE5 483 aa11.48□□□□□ -0.57
RPAIN-216ENST00000575599 PRSS57Q6UWY2 283 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms