RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 LCN1P1Q5VSP4 162 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 SLC16A14Q7RTX9 510 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 WDR31Q8NA23 367 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 SETD9Q8NE22 299 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 OR6K6Q8NGW6 343 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 WFIKKN1Q96NZ8 548 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 SPOCK3Q9BQ16 436 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 WACQ9BTA9 647 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 OR51V1Q9H2C8 321 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 ZNF226Q9NYT6 803 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 SLC25A15Q9Y619 301 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 ANKHD1Q8IWZ3 2542 aaKnown RBP14.94□□□□□ -0.02
NUP88-210ENST00000574867 HLA-DQA2P01906 255 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 CST2P09228 141 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 SLC2A5P22732 501 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 FMO3P31513 532 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 KIR2DL3P43628 341 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 CAPZA2P47755 286 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 KLHL12Q53G59 568 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 SLC25A30Q5SVS4 291 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 AADACL4Q5VUY2 407 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 ZNF691Q5VV52 312 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 SKA3Q8IX90 412 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 BBS1Q8NFJ9 593 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 OR51L1Q8NGJ5 315 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 OR52N5Q8NH56 324 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 FOXN4Q96NZ1 517 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 PSMG3-AS1Q96PY0 264 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 H2AFY2Q9P0M6 372 aaPredicted RBP14.94□□□□□ -0.02
NUP88-210ENST00000574867 KCNG2Q9UJ96 466 aa14.94□□□□□ -0.02
NUP88-210ENST00000574867 C12orf71A8MTZ7 269 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 FAM171A2A8MVW0 826 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 PCBD1P61457 104 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 RPS7P62081 194 aaKnown RBP14.93□□□□□ -0.02
NUP88-210ENST00000574867 LINC01590Q5TEZ4 76 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 MEDAGQ5VYS4 303 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 MEX3BQ6ZN04 569 aaKnown RBP14.93□□□□□ -0.02
NUP88-210ENST00000574867 ENTHD1Q8IYW4 607 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 OR10H5Q8NGA6 315 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 LINC01560Q8TB33 94 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 FAM222BQ8WU58 562 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 C11orf40Q8WZ69 217 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 HTRA1Q92743 480 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 TFAP2CQ92754 450 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 SH3GL3Q99963 347 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 NGBQ9NPG2 151 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 ZNF224Q9NZL3 707 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 SPTAN1Q13813 2472 aaKnown RBP14.93□□□□□ -0.02
NUP88-210ENST00000574867 SLC22A31A6NKX4 558 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 TEKQ02763 1124 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 APOFQ13790 326 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 SNTB1Q13884 538 aaKnown RBP14.93□□□□□ -0.02
NUP88-210ENST00000574867 GSG1Q2KHT4 349 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 SYT9Q86SS6 491 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 LRRC18Q8N456 261 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 ZNRF4Q8WWF5 429 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 RFKQ969G6 155 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 ZNF416Q9BWM5 594 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 EMC7Q9NPA0 242 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 FBXL3Q9UKT7 428 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 POLR1DQ9Y2S0 133 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 COMMD3-BMI1R4GMX3 469 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 HSPE1-MOB4S4R3N1 261 aa14.93□□□□□ -0.02
NUP88-210ENST00000574867 HLA-HP01893 362 aa14.92□□□□□ -0.02
NUP88-210ENST00000574867 TFP02787 698 aa14.92□□□□□ -0.02
NUP88-210ENST00000574867 THBDP07204 575 aa14.92□□□□□ -0.02
NUP88-210ENST00000574867 DBPQ10586 325 aaPredicted RBP14.92□□□□□ -0.02
NUP88-210ENST00000574867 AQP6Q13520 282 aa14.92□□□□□ -0.02
NUP88-210ENST00000574867 ENDOGQ14249 297 aaKnown RBP14.92□□□□□ -0.02
NUP88-210ENST00000574867 OCLNQ16625 522 aa14.92□□□□□ -0.02
NUP88-210ENST00000574867 FAM169BQ8N8A8 192 aa14.92□□□□□ -0.02
NUP88-210ENST00000574867 ZC3HAV1LQ96H79 300 aaKnown RBP14.92□□□□□ -0.02
NUP88-210ENST00000574867 MARCH7Q9H992 704 aa14.92□□□□□ -0.02
NUP88-210ENST00000574867 CCNB1IP1Q9NPC3 277 aa14.92□□□□□ -0.02
NUP88-210ENST00000574867 A0A1W2PR80 420 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 SNTNA6NMZ2 147 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 MPZL1O95297 269 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 GPANK1O95872 356 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 SCG5P05408 212 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 EPXP11678 715 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 CD79AP11912 226 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 ZNF823P16415 610 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 GABRB1P18505 474 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 GSTT1P30711 240 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 ARR3P36575 388 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 CDH11P55287 796 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 IL5RAQ01344 420 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 TMED1Q13445 227 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 TMEM53Q6P2H8 277 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 C22orf34Q6ZV56 151 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 MEPCEQ7L2J0 689 aaKnown RBP14.91□□□□□ -0.02
NUP88-210ENST00000574867 C8orf59Q8N0T1 100 aaPredicted RBP14.91□□□□□ -0.02
NUP88-210ENST00000574867 RHOXF1Q8NHV9 184 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 Q96MT0 163 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 ZNF582Q96NG8 517 aaPredicted RBP14.91□□□□□ -0.02
NUP88-210ENST00000574867 RASSF1Q9NS23 344 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 MRPL22Q9NWU5 206 aaKnown RBP14.91□□□□□ -0.02
NUP88-210ENST00000574867 B3GNT2Q9NY97 397 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 CRIM1Q9NZV1 1036 aa14.91□□□□□ -0.02
NUP88-210ENST00000574867 USP9YO00507 2555 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms