RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SPACA1Q9HBV2 294 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 PRSS16Q9NQE7 514 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 MRPS23Q9Y3D9 190 aaKnown RBP8.71□□□□□ -1.02
CCDC40-212ENST00000574799 ADAM18Q9Y3Q7 739 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 ATG4BQ9Y4P1 393 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 PUS1Q9Y606 427 aaKnown RBP eCLIP8.71□□□□□ -1.02
CCDC40-212ENST00000574799 DCDC2BA2VCK2 349 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 TVP23AA6NH52 213 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 CTNSO60931 367 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 OR6A2O95222 327 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 HIST1H1CP16403 213 aaKnown RBP8.71□□□□□ -1.02
CCDC40-212ENST00000574799 PSMB6P28072 239 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 PPP2CBP62714 309 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 PPP2CAP67775 309 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 EEF1A1P68104 462 aaKnown RBP8.71□□□□□ -1.02
CCDC40-212ENST00000574799 DPTQ07507 201 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 EEF1A1P5Q5VTE0 462 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 ERN2Q76MJ5 926 aaKnown RBP8.71□□□□□ -1.02
CCDC40-212ENST00000574799 NRROSQ86YC3 692 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 POMGNT2Q8NAT1 580 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 AVL9Q8NBF6 648 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 OR5K2Q8NHB8 316 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 RGP1Q92546 391 aaPredicted RBP8.71□□□□□ -1.02
CCDC40-212ENST00000574799 FGF14Q92915 247 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 HIST1H2BAQ96A08 127 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 NECAB3Q96P71 396 aaPredicted RBP8.71□□□□□ -1.02
CCDC40-212ENST00000574799 ARHGDIGQ99819 225 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 GGACTQ9BVM4 153 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 KCNJ16Q9NPI9 418 aa8.71□□□□□ -1.02
CCDC40-212ENST00000574799 GAR1Q9NY12 217 aaKnown RBP8.71□□□□□ -1.02
CCDC40-212ENST00000574799 MDC1Q14676 2089 aaKnown RBP8.71□□□□□ -1.02
CCDC40-212ENST00000574799 FANCMQ8IYD8 2048 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 A0A1W2PPE3 182 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF749O43361 778 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 LRP3O75074 770 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 PCDH8O95206 1070 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF44P15621 663 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 PPM1FP49593 454 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-212ENST00000574799 BTN3A2P78410 334 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 IL34Q6ZMJ4 242 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF836Q6ZNA1 936 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SYS1Q8N2H4 156 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF417Q8TAU3 575 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ZCCHC10Q8TBK6 192 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SECTM1Q8WVN6 248 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 LINC00615Q96LM1 132 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ZDHHC5Q9C0B5 715 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 OR52A5Q9H2C5 316 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 MKKSQ9NPJ1 570 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-212ENST00000574799 STEAP1Q9UHE8 339 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 WIF1Q9Y5W5 379 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 KPTNQ9Y664 436 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 C5orf52A6NGY3 159 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SHISA7A6NL88 538 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 NUDT19A8MXV4 375 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 BHLHE40O14503 412 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 PIN1P1O15428 100 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 OGG1O15527 345 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SERPINF1P36955 418 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ALG10BQ5I7T1 473 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 AGBL4Q5VU57 503 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 LEG1Q6P5S2 330 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 AMZ2Q86W34 360 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 FAM219AQ8IW50 185 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 OR5AP2Q8NGF4 316 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 OR14K1Q8NGZ2 314 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 GPR148Q8TDV2 347 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 WDR34Q96EX3 536 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 DNAJA3Q96EY1 480 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 KIRREL1Q96J84 757 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 AICDAQ9GZX7 198 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SEMA6CQ9H3T2 930 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 EPHX3Q9H6B9 360 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 MRPS33Q9Y291 106 aaKnown RBP8.7□□□□□ -1.02
CCDC40-212ENST00000574799 CARHSP1Q9Y2V2 147 aaKnown RBP8.7□□□□□ -1.02
CCDC40-212ENST00000574799 PCDHGA1Q9Y5H4 931 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 DMRT1Q9Y5R6 373 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 URGCP-MRPS24S4R325 110 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 A0A1W2PS29 197 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 BTBD17A6NE02 478 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 NDUFB2O95178 105 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 H2AFB1P0C5Y9 115 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ERGP11308 486 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 DLX2Q07687 328 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SLC9A3R2Q15599 337 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 TMEM52BQ4KMG9 183 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 AKR1C8PQ5T2L2 129 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 LIPNQ5VXI9 398 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF761Q86XN6 746 aaPredicted RBP8.7□□□□□ -1.02
CCDC40-212ENST00000574799 NRSN1Q8IZ57 195 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ACOT4Q8N9L9 421 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 UBAC2Q8NBM4 344 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 PLPP7Q8NBV4 271 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 OR4S1Q8NGB4 309 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 OR2L2Q8NH16 312 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SLC2A12Q8TD20 617 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 ASB13Q8WXK3 278 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SMARCD2Q92925 531 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 FAM3DQ96BQ1 224 aa8.7□□□□□ -1.02
CCDC40-212ENST00000574799 SLC25A36Q96CQ1 311 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms