RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 LGALS14Q8TCE9 139 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SDR42E1Q8WUS8 393 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 OR8D1Q8WZ84 308 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 GTF2H4Q92759 462 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 RPEQ96AT9 228 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 LINC00479Q96M42 142 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SERPINB12Q96P63 405 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 TSG101Q99816 390 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SH3GL3Q99963 347 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 PAIP2Q9BPZ3 127 aaKnown RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 UTP23Q9BRU9 249 aaKnown RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 TRIM51Q9BSJ1 452 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 KRTAP9-9Q9BYP9 154 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 ULBP2Q9BZM5 246 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 HDHD2Q9H0R4 259 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 OR51J1Q9H342 316 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 NXF3Q9H4D5 531 aaKnown RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 UBE2ZQ9H832 354 aaPredicted RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 KCNJ16Q9NPI9 418 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SCRT2Q9NQ03 307 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 TMEM9BQ9NQ34 198 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 MS4A12Q9NXJ0 267 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 QPCTLQ9NXS2 382 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 MTRF1LQ9UGC7 380 aaKnown RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 CLEC2DQ9UHP7 191 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 MRM2Q9UI43 246 aaKnown RBP1.62□□□□□ -2.15
CHD3-217ENST00000574022 BTNL2Q9UIR0 455 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 ASF1AQ9Y294 204 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 HYOU1Q9Y4L1 999 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 FLVCR1Q9Y5Y0 555 aa1.62□□□□□ -2.15
CHD3-217ENST00000574022 SBNO1A3KN83 1393 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 IGLV8-61A0A075B6I0 122 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 IGKV1D-13A0A0B4J2D9 117 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 IGHV3-35A0A0C4DH35 117 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 A0A0G2JLM5 398 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 LOC100996750A0A140TA64 210 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 A0A1W2PQ72 361 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 PRR23AA6NEV1 266 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 MGAT4DA6NG13 374 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 IFITM10A6NMD0 228 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 HACD1B0YJ81 288 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 NME4O00746 187 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 TOR1AO14656 332 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 PRMT5O14744 637 aaPredicted RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 TNFSF11O14788 317 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 NUPL2O15504 423 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 RAD51CO43502 376 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 SCN2BO60939 215 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 ICOSLGO75144 302 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 NIPSNAP2O75323 286 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 LCA5LO95447 670 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 AIFM1O95831 613 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 FADS2O95864 444 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 TBX6O95947 436 aaPredicted RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 CATP04040 527 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 SEMG1P04279 462 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 ARG1P05089 322 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 S100A6P06703 90 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 RHOCP08134 193 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 IGKV1-13P0DP09 117 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 CSNK2A2P19784 350 aaPredicted RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 IL32P24001 234 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 AK4P27144 223 aaPredicted RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 CD40LGP29965 261 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 BTCP35070 178 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 SERPINB5P36952 375 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 GPX4P36969 197 aaPredicted RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 CSNK1A1P48729 337 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 DNASE1L1P49184 302 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 RAB7AP51149 207 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 SLC25A1P53007 311 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 OR2B6P58173 313 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 NUTF2P61970 127 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 SLC35B1P78383 322 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 IRX1P78414 480 aaPredicted RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 CXCL6P80162 114 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 MS4A2Q01362 244 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 SEMG2Q02383 582 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 ZNF763Q0D2J5 394 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 PMS2P3Q13401 168 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 AQP6Q13520 282 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 TFDP2Q14188 446 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 OR7A5Q15622 319 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 TNXAQ16473 311 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 NRF1Q16656 503 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 NDUFAF6Q330K2 333 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 ZBED5Q49AG3 693 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 EOGTQ5NDL2 527 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 C1orf100Q5SVJ3 147 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 DUPD1Q68J44 220 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 APOBEC3HQ6NTF7 200 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 RWDD4Q6NW29 188 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 ZNF613Q6PF04 617 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 WDR82Q6UXN9 313 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 GPRIN3Q6ZVF9 776 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 ZNF589Q86UQ0 364 aaPredicted RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 SLC25A42Q86VD7 318 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 THOC6Q86W42 341 aaKnown RBP1.61□□□□□ -2.15
CHD3-217ENST00000574022 ZADH2Q8N4Q0 377 aa1.61□□□□□ -2.15
CHD3-217ENST00000574022 CYB561A3Q8NBI2 242 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms