RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PIGTQ969N2 578 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 NABP1Q96AH0 204 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 PRRG3Q9BZD7 231 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 RACGAP1Q9H0H5 632 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 GABARAPL1Q9H0R8 117 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 S100A14Q9HCY8 104 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 SRA1Q9HD15 236 aaKnown RBP11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 POLE4Q9NR33 117 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 CISD1Q9NZ45 108 aaKnown RBP11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZNF224Q9NZL3 707 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 ST6GALNAC2Q9UJ37 374 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 COA3Q9Y2R0 106 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 SPEF1Q9Y4P9 236 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 TIMM10BQ9Y5J6 103 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 ORC6Q9Y5N6 252 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 ATP23Q9Y6H3 246 aa11.11□□□□□ -0.63
TRAPPC1-206ENST00000573989 PLCE1Q9P212 2302 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 RAI1Q7Z5J4 1906 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 A0A1W2PPR1 153 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZNF503-AS2A6NEH8 195 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 SHISA9B4DS77 424 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 TMCC2O75069 709 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 TP53P04637 393 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 SERPINA5P05154 406 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 IGFBP1P08833 259 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 DAPP51397 102 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 LSM6P62312 80 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 GALK2Q01415 458 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 ETFDHQ16134 617 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZBTB46Q86UZ6 589 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 NPEPL1Q8NDH3 523 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR10H5Q8NGA6 315 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 PLEKHA8Q96JA3 519 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 CCL19Q99731 98 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 RBM4BQ9BQ04 359 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 RBM4Q9BWF3 364 aaKnown RBP11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 CMC2Q9NRP2 79 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 OAZ3Q9UMX2 235 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 B9D1Q9UPM9 204 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 MOKQ9UQ07 419 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 POLR1DQ9Y2S0 133 aa11.1□□□□□ -0.63
TRAPPC1-206ENST00000573989 HRNRQ86YZ3 2850 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR6C68A6NDL8 312 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 ATP6V1G2-DDX39BF2Z307 99 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 H3BNX3 289 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 HLA-DQA2P01906 255 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 PATE4P0C8F1 98 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZNF14P17017 642 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZNF32P17041 273 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 IGFBP5P24593 272 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 APLNRP35414 380 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 BLVRAP53004 296 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 CRISP1P54107 249 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 SPOCK1Q08629 439 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 SCRN3Q0VDG4 424 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 AQP6Q13520 282 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 GINS1Q14691 196 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 RAB39AQ14964 217 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 TBC1D28Q2M2D7 210 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 KDM4DQ6B0I6 523 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZNF544Q6NX49 715 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR6V1Q8N148 313 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 SLC37A3Q8NCC5 494 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 SLC30A7Q8NEW0 376 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 PROKR2Q8NFJ6 384 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 OR4Q3Q8NH05 313 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 HTRA1Q92743 480 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 TSSK2Q96PF2 358 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 PKP2Q99959 881 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 DHRS9Q9BPW9 319 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 ZNF416Q9BWM5 594 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 CDADC1Q9BWV3 514 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 CDH20Q9HBT6 801 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 PLEKHA6Q9Y2H5 1048 aa11.09□□□□□ -0.63
TRAPPC1-206ENST00000573989 TACC2O95359 2948 aa11.08□□□□□ -0.63
TRAPPC1-206ENST00000573989 NAV2Q8IVL1 2488 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 FBN2P35556 2912 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 IGLV1-36A0A0B4J1U3 117 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 IGHV2OR16-5A0A0B4J2B6 119 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 SAC3D1A6NKF1 404 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 CELA3BP08861 270 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 MMP7P09237 267 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 BMP4P12644 408 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 APOBEC3AP31941 199 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 FABP6P51161 128 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 RPS23P62266 143 aaKnown RBP11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 CDK5Q00535 292 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 CRMP1Q14194 572 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 KCNMB1Q16558 191 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 PABPC1L2AQ5JQF8 200 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 AGAP6Q5VW22 663 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 UNQ6126/PRO20091Q6UXV3 157 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 FBXL14Q8N1E6 418 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 PQLC1Q8N2U9 271 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 IQCF1Q8N6M8 205 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 CYB561A3Q8NBI2 242 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 NUP37Q8NFH4 326 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 LILRB1Q8NHL6 650 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 FGFBP3Q8TAT2 258 aa11.08□□□□□ -0.64
TRAPPC1-206ENST00000573989 SMAP2Q8WU79 429 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms