RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 SSX4O60224 188 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 DNAJC8O75937 253 aaPredicted RBP23.92■■□□□ 1.42
SCARF1-207ENST00000573867 LY6HO94772 140 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 IGFBP1P08833 259 aaPredicted RBP23.92■■□□□ 1.42
SCARF1-207ENST00000573867 RAP2AP10114 183 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 APEHP13798 732 aaKnown RBP23.92■■□□□ 1.42
SCARF1-207ENST00000573867 APEX1P27695 318 aaKnown RBP23.92■■□□□ 1.42
SCARF1-207ENST00000573867 AQP12AQ8IXF9 295 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 SVOPLQ8N434 492 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 AKR7LQ8NHP1 331 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 ERMAPQ96PL5 475 aaPredicted RBP23.92■■□□□ 1.42
SCARF1-207ENST00000573867 SORCS2Q96PQ0 1159 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 DOK1Q99704 481 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 BDH2Q9BUT1 245 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 CHID1Q9BWS9 393 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 CADM1Q9BY67 442 aaKnown RBP23.92■■□□□ 1.42
SCARF1-207ENST00000573867 EGLN3Q9H6Z9 239 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 BARX1Q9HBU1 254 aaPredicted RBP23.92■■□□□ 1.42
SCARF1-207ENST00000573867 EMC7Q9NPA0 242 aa23.92■■□□□ 1.42
SCARF1-207ENST00000573867 SMAD7O15105 426 aaKnown RBP23.91■■□□□ 1.42
SCARF1-207ENST00000573867 GASTP01350 101 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 CST2P09228 141 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 SLC6A6P31641 620 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 RPS6KA3P51812 740 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 SNRPD2P62316 118 aaKnown RBP23.91■■□□□ 1.42
SCARF1-207ENST00000573867 PSG4Q00888 419 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 RAB35Q15286 201 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 ADCK1Q86TW2 530 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 ZNF416Q9BWM5 594 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 WNT5BQ9H1J7 359 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 CCNB1IP1Q9NPC3 277 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 POMPQ9Y244 141 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 SAMHD1Q9Y3Z3 626 aaKnown RBP23.91■■□□□ 1.42
SCARF1-207ENST00000573867 PMF1-BGLAPU3KQ54 211 aa23.91■■□□□ 1.42
SCARF1-207ENST00000573867 DCTN6O00399 190 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 GSC2O15499 205 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 CCNB2O95067 398 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 MSR1P21757 451 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 GLRXP35754 106 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 NUDT6P53370 316 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 LRP11Q86VZ4 500 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 OR8D4Q8NGM9 314 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 TSSK2Q96PF2 358 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 MRPL37Q9BZE1 423 aaKnown RBP23.9■■□□□ 1.42
SCARF1-207ENST00000573867 PLA2G12AQ9BZM1 189 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 OR2H1Q9GZK4 316 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 NUAK2Q9H093 628 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 SLC7A8Q9UHI5 535 aa23.9■■□□□ 1.42
SCARF1-207ENST00000573867 DHRS12A0PJE2 317 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 ARPC3O15145 178 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 SLC16A7O60669 478 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 MPZL1O95297 269 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 HIST1H1CP16403 213 aaKnown RBP23.89■■□□□ 1.41
SCARF1-207ENST00000573867 ERFP50548 548 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 HSF2Q03933 536 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 FLOT2Q14254 428 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 ZNF525Q8N782 197 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 AQP11Q8NBQ7 271 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 POP5Q969H6 163 aaKnown RBP23.89■■□□□ 1.41
SCARF1-207ENST00000573867 MRPL24Q96A35 216 aaKnown RBP23.89■■□□□ 1.41
SCARF1-207ENST00000573867 IFT27Q9BW83 186 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 KCNN2Q9H2S1 579 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 RERGLQ9H628 205 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 REEP1Q9H902 201 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 FZR1Q9UM11 496 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 COA3Q9Y2R0 106 aaPredicted RBP23.89■■□□□ 1.41
SCARF1-207ENST00000573867 CMAHPQ9Y471 501 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 CDH10Q9Y6N8 788 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 NF1P21359 2839 aa23.89■■□□□ 1.41
SCARF1-207ENST00000573867 LOC100509620A0A075B734 347 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 IQCMA0A1B0GVH7 501 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 STAMBPO95630 424 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 SNAP29O95721 258 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 GPANK1O95872 356 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 FAM157BP0CG42 384 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 BMP4P12644 408 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 ERVS71-1P61550 626 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 GALK2Q01415 458 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 PLP2Q04941 152 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 MICAQ29983 383 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 ZCCHC24Q8N2G6 241 aaKnown RBP23.88■■□□□ 1.41
SCARF1-207ENST00000573867 LINC00471Q8N535 108 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 MAPK1IP1LQ8NDC0 245 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 OR4K13Q8NH42 304 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 POM121L2Q96KW2 1035 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 NMNAT3Q96T66 252 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 OR51B6Q9H340 312 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 C1orf198Q9H425 327 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 CDH20Q9HBT6 801 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 MYEF2Q9P2K5 600 aaKnown RBP23.88■■□□□ 1.41
SCARF1-207ENST00000573867 SPEF1Q9Y4P9 236 aa23.88■■□□□ 1.41
SCARF1-207ENST00000573867 IGHV4-30-2A0A087WSY4 118 aa23.87■■□□□ 1.41
SCARF1-207ENST00000573867 TCRBV3S1A0A5B6 114 aa23.87■■□□□ 1.41
SCARF1-207ENST00000573867 RNF223E7ERA6 249 aa23.87■■□□□ 1.41
SCARF1-207ENST00000573867 KHDRBS3O75525 346 aaKnown RBP23.87■■□□□ 1.41
SCARF1-207ENST00000573867 EFNA4P52798 201 aa23.87■■□□□ 1.41
SCARF1-207ENST00000573867 TBC1D28Q2M2D7 210 aa23.87■■□□□ 1.41
SCARF1-207ENST00000573867 CLEC12AQ5QGZ9 265 aa23.87■■□□□ 1.41
SCARF1-207ENST00000573867 LEG1Q6P5S2 330 aa23.87■■□□□ 1.41
SCARF1-207ENST00000573867 TMEM179BQ7Z7N9 219 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms