RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 CDH20Q9HBT6 801 aa17.86■□□□□ 0.45
CHMP6-204ENST00000572778 POMPQ9Y244 141 aa17.86■□□□□ 0.45
CHMP6-204ENST00000572778 CMAHPQ9Y471 501 aa17.86■□□□□ 0.45
CHMP6-204ENST00000572778 USF3Q68DE3 2245 aa17.86■□□□□ 0.45
CHMP6-204ENST00000572778 H7C417 338 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 IMPA2O14732 288 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 GPRIN2O60269 458 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 ATP5HO75947 161 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 CST1P01037 141 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 CST2P09228 141 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 FOSL1P15407 271 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 MSR1P21757 451 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 APEX1P27695 318 aaKnown RBP17.85■□□□□ 0.45
CHMP6-204ENST00000572778 NOS3P29474 1203 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 APLNRP35414 380 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 CDKN2AP42771 156 aaKnown RBP17.85■□□□□ 0.45
CHMP6-204ENST00000572778 RASSF2P50749 326 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 NUDT6P53370 316 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 EFNB3Q15768 340 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 MICAQ29983 383 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 TBC1D28Q2M2D7 210 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 ZNF620Q6ZNG0 422 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 PTCHD4Q6ZW05 846 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 JAZF1Q86VZ6 243 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 AQP11Q8NBQ7 271 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 OR1J2Q8NGS2 313 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 LRMDAQ9H2I8 198 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 PLK3Q9H4B4 646 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 EGLN3Q9H6Z9 239 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 EMC7Q9NPA0 242 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 POLE4Q9NR33 117 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 VSX1Q9NZR4 365 aaPredicted RBP17.85■□□□□ 0.45
CHMP6-204ENST00000572778 SLC7A8Q9UHI5 535 aa17.85■□□□□ 0.45
CHMP6-204ENST00000572778 GNGT2O14610 69 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 SMAD7O15105 426 aaKnown RBP17.84■□□□□ 0.45
CHMP6-204ENST00000572778 KHDRBS3O75525 346 aaKnown RBP17.84■□□□□ 0.45
CHMP6-204ENST00000572778 SCG5P05408 212 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 INHBBP09529 407 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 CCNOP22674 350 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 GLRXP35754 106 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 ERFP50548 548 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 PCBD1P61457 104 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 PSG4Q00888 419 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 CLEC12AQ5QGZ9 265 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 ZNF770Q6IQ21 691 aaPredicted RBP17.84■□□□□ 0.45
CHMP6-204ENST00000572778 LEG1Q6P5S2 330 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 CIARTQ8N365 385 aaPredicted RBP17.84■□□□□ 0.45
CHMP6-204ENST00000572778 SVOPLQ8N434 492 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 OR4K13Q8NH42 304 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 AKR7LQ8NHP1 331 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 VRK1Q99986 396 aaPredicted RBP17.84■□□□□ 0.45
CHMP6-204ENST00000572778 ZNF416Q9BWM5 594 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 NUAK2Q9H093 628 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 OR51B6Q9H340 312 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 COA3Q9Y2R0 106 aaPredicted RBP17.84■□□□□ 0.45
CHMP6-204ENST00000572778 TIMM10BQ9Y5J6 103 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 VPS13CQ709C8 3753 aa17.84■□□□□ 0.45
CHMP6-204ENST00000572778 ARID1AO14497 2285 aa17.83■□□□□ 0.45
CHMP6-204ENST00000572778 HEATR1Q9H583 2144 aaKnown RBP17.83■□□□□ 0.45
CHMP6-204ENST00000572778 C12orf71A8MTZ7 269 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 ARPC3O15145 178 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 FAM157BP0CG42 384 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 CENPAP49450 140 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 RPS23P62266 143 aaKnown RBP17.83■□□□□ 0.44
CHMP6-204ENST00000572778 TNK1Q13470 666 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 ENDOGQ14249 297 aaKnown RBP17.83■□□□□ 0.44
CHMP6-204ENST00000572778 SLC35F1Q5T1Q4 408 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 UGT2A3Q6UWM9 527 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 GLB1L2Q8IW92 636 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 PAQR4Q8N4S7 273 aaPredicted RBP17.83■□□□□ 0.44
CHMP6-204ENST00000572778 CPEB3Q8NE35 698 aaKnown RBP17.83■□□□□ 0.44
CHMP6-204ENST00000572778 OR52L1Q8NGH7 329 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 NMNAT3Q96T66 252 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 OR2H1Q9GZK4 316 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 CDH10Q9Y6N8 788 aa17.83■□□□□ 0.44
CHMP6-204ENST00000572778 MAP1AP78559 2803 aaPredicted RBP17.83■□□□□ 0.44
CHMP6-204ENST00000572778 RENP00797 406 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 HIST1H1CP16403 213 aaKnown RBP17.82■□□□□ 0.44
CHMP6-204ENST00000572778 HOXB6P17509 224 aaKnown RBP17.82■□□□□ 0.44
CHMP6-204ENST00000572778 STOMP27105 288 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 CRABP1P29762 137 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 OTPQ5XKR4 325 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 RPL13AP3Q6NVV1 102 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 DNM1P34Q6PK57 102 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 RASSF6Q6ZTQ3 369 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 ALDH16A1Q8IZ83 802 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 OR10G2Q8NGC3 310 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 TSSK2Q96PF2 358 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 DOK1Q99704 481 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 WNT5BQ9H1J7 359 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 GSX1Q9H4S2 264 aaPredicted RBP17.82■□□□□ 0.44
CHMP6-204ENST00000572778 YY1AP1Q9H869 796 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 SRA1Q9HD15 236 aaKnown RBP17.82■□□□□ 0.44
CHMP6-204ENST00000572778 FZR1Q9UM11 496 aa17.82■□□□□ 0.44
CHMP6-204ENST00000572778 TCRBV3S1A0A5B6 114 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 TMEM129A0AVI4 362 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 IDH3BO43837 385 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 SNAP29O95721 258 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 GDI2P50395 445 aaKnown RBP17.81■□□□□ 0.44
CHMP6-204ENST00000572778 EFNA4P52798 201 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms