RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 C1orf229Q6ZS94 237 aaPredicted RBP15.42■□□□□ 0.06
CHD3-214ENST00000572579 OFCC1Q8IZS5 231 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 ICA1LQ8NDH6 482 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 OR1J2Q8NGS2 313 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 OR1J1Q8NGS3 322 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 OR13C2Q8NGS9 318 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 ALG12Q9BV10 488 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 BCL2L14Q9BZR8 327 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 OR2H1Q9GZK4 316 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 C1orf198Q9H425 327 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 NKIRAS2Q9NYR9 191 aa15.42■□□□□ 0.06
CHD3-214ENST00000572579 AVPP01185 164 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 PTHP01270 115 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 COX4I1P13073 169 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 HNF1AP20823 631 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 APLNRP35414 380 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 CRYBB2P43320 205 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 MMP15P51511 669 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 HSF2Q03933 536 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 CD47Q08722 323 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 AVPI1Q5T686 147 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 RINLQ6ZS11 566 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 RFPL4BQ6ZWI9 263 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 CBLL1Q75N03 491 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 RP9Q8TA86 221 aaKnown RBP15.41■□□□□ 0.06
CHD3-214ENST00000572579 TMEM186Q96B77 213 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 MRGBPQ9NV56 204 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 HIF1ANQ9NWT6 349 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 SLCO1C1Q9NYB5 712 aa15.41■□□□□ 0.06
CHD3-214ENST00000572579 NBEAL1Q6ZS30 2694 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 C5orf49A4QMS7 147 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 H7C1C5 153 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 CXCR6O00574 342 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 IMPA2O14732 288 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 SLC22A2O15244 555 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 DEAF1O75398 565 aaPredicted RBP15.4■□□□□ 0.06
CHD3-214ENST00000572579 IGHV1-46P01743 117 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 GSK3BP49841 420 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 SLC7A2P52569 658 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 LCN6P62502 163 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 TRAM2Q15035 370 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 TSTQ16762 297 aaKnown RBP15.4■□□□□ 0.06
CHD3-214ENST00000572579 OTPQ5XKR4 325 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 ZNF774Q6NX45 483 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 HDDC2Q7Z4H3 204 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 SLC25A40Q8TBP6 338 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 FNDC11Q9BVV2 318 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 OR2J1Q9GZK6 312 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 KLHL21Q9UJP4 597 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 ADAM18Q9Y3Q7 739 aa15.4■□□□□ 0.06
CHD3-214ENST00000572579 ZSCAN5BA6NJL1 495 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 EFCAB9A8MZ26 197 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 MSMBP08118 114 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 CST2P09228 141 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 GPR4P46093 362 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 MVKQ03426 396 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 TAF11Q15544 211 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 TMEM154Q6P9G4 183 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 USP51Q70EK9 711 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 OAFQ86UD1 273 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 KLF14Q8TD94 323 aaPredicted RBP15.39■□□□□ 0.05
CHD3-214ENST00000572579 IPCEF1Q8WWN9 437 aaPredicted RBP15.39■□□□□ 0.05
CHD3-214ENST00000572579 ACOT11Q8WXI4 607 aaPredicted RBP15.39■□□□□ 0.05
CHD3-214ENST00000572579 HSH2DQ96JZ2 352 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 RBP7Q96R05 134 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 LRMDAQ9H2I8 198 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 POFUT1Q9H488 388 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 CCNB1IP1Q9NPC3 277 aa15.39■□□□□ 0.05
CHD3-214ENST00000572579 STX18Q9P2W9 335 aaKnown RBP15.39■□□□□ 0.05
CHD3-214ENST00000572579 HTR3EA5X5Y0 456 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 SPRY3O43610 288 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 ICMTO60725 284 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 PTP4A3O75365 173 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 ZNF682O95780 498 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 SERPINA1P01009 418 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 IFNW1P05000 195 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 NCK1P16333 377 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 ITGA2P17301 1181 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 SELENOVP59797 346 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 PCGF3Q3KNV8 242 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 MBNL2Q5VZF2 373 aaKnown RBP15.38■□□□□ 0.05
CHD3-214ENST00000572579 TMPRSS11FQ6ZWK6 438 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 MBOAT2Q6ZWT7 520 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 FAM122BQ7Z309 247 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 FAM156AQ8NDB6 213 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 LZICQ8WZA0 190 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 Q96M85 177 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 LRRC37BQ96QE4 947 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 NMNAT1Q9HAN9 279 aaPredicted RBP15.38■□□□□ 0.05
CHD3-214ENST00000572579 EMC7Q9NPA0 242 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 G6PC2Q9NQR9 355 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 POLE4Q9NR33 117 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 DCAF16Q9NXF7 216 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 TIMM10BQ9Y5J6 103 aa15.38■□□□□ 0.05
CHD3-214ENST00000572579 IGHV1-69-2A0A0G2JMI3 117 aa15.37■□□□□ 0.05
CHD3-214ENST00000572579 UBOX5O94941 541 aa15.37■□□□□ 0.05
CHD3-214ENST00000572579 VENTXO95231 258 aa15.37■□□□□ 0.05
CHD3-214ENST00000572579 TFP02787 698 aa15.37■□□□□ 0.05
CHD3-214ENST00000572579 SRP14P37108 136 aaKnown RBP15.37■□□□□ 0.05
CHD3-214ENST00000572579 GDI2P50395 445 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms