RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 NKX2-6A6NCS4 301 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 DENRO43583 198 aaKnown RBP20.56■□□□□ 0.88
RAB40C-212ENST00000569575 UBL3O95164 117 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 GAAP10253 952 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 ZNF823P16415 610 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 ARR3P36575 388 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 UBE2NP61088 152 aaKnown RBP20.56■□□□□ 0.88
RAB40C-212ENST00000569575 APOFQ13790 326 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 GGTLC2Q14390 218 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 ETFDHQ16134 617 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 TBRG1Q3YBR2 411 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 KLHL12Q53G59 568 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 C6orf52Q5T4I8 152 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 OR10H5Q8NGA6 315 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 NABP1Q96AH0 204 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 ZNF582Q96NG8 517 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-212ENST00000569575 MNTQ99583 582 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 HCAR1Q9BXC0 346 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 NGBQ9NPG2 151 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 PCDHGB1Q9Y5G3 927 aa20.56■□□□□ 0.88
RAB40C-212ENST00000569575 UBR5O95071 2799 aaPredicted RBP20.56■□□□□ 0.88
RAB40C-212ENST00000569575 RAD51DO75771 328 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 HLA-DQA2P01906 255 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 GSTT1P30711 240 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 CDH11P55287 796 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 FOXG1P55316 489 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-212ENST00000569575 CXCR4P61073 352 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 RPS7P62081 194 aaKnown RBP20.55■□□□□ 0.88
RAB40C-212ENST00000569575 SRSF1Q07955 248 aaKnown RBP eCLIP20.55■□□□□ 0.88
RAB40C-212ENST00000569575 SGCAQ16586 387 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 PCK2Q16822 640 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 C3orf36Q3SXR2 165 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 SHFQ7M4L6 423 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 OR6K6Q8NGW6 343 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 MYCBPQ99417 103 aaPredicted RBP20.55■□□□□ 0.88
RAB40C-212ENST00000569575 ACTR6Q9GZN1 396 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 RASSF1Q9NS23 344 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 RPL36Q9Y3U8 105 aaKnown RBP20.55■□□□□ 0.88
RAB40C-212ENST00000569575 DOPEY1Q5JWR5 2465 aa20.55■□□□□ 0.88
RAB40C-212ENST00000569575 HCFC1P51610 2035 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 IRGMA1A4Y4 181 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 B4GALT1P15291 398 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 AQP6Q13520 282 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 RHOUQ7L0Q8 258 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 SLC16A14Q7RTX9 510 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 ZNF454Q8N9F8 522 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 UBE2FQ969M7 185 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 CDADC1Q9BWV3 514 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 MED20Q9H944 212 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 TIMM10BQ9Y5J6 103 aa20.54■□□□□ 0.88
RAB40C-212ENST00000569575 PTHP01270 115 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 GYPBP06028 91 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 GNAO1P09471 354 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 CLUP10909 449 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 PYCR1P32322 319 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 SCRN3Q0VDG4 424 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 CDSNQ15517 529 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 C9orf135Q5VTT2 229 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 TMEM53Q6P2H8 277 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 C11orf40Q8WZ69 217 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 S100PBPQ96BU1 408 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 DACH2Q96NX9 599 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 INTS14Q96SY0 518 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 YIPF3Q9GZM5 350 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 PLCXD1Q9NUJ7 323 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 MRPS18AQ9NVS2 196 aaKnown RBP20.53■□□□□ 0.88
RAB40C-212ENST00000569575 TMEM14AQ9Y6G1 99 aa20.53■□□□□ 0.88
RAB40C-212ENST00000569575 TUBAL3A6NHL2 446 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 PYCARD-AS1I3L0S3 204 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 ENTPD6O75354 484 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 CLIC3O95833 236 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 TFP02787 698 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 CDAP32320 146 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 MTNR1AP48039 350 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 ENTPD1P49961 510 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 CDK5R2Q13319 367 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 KLHL22Q53GT1 634 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 EGFL6Q8IUX8 553 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 SKA3Q8IX90 412 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 GJC3Q8NFK1 279 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 C1orf198Q9H425 327 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 CCNB1IP1Q9NPC3 277 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 B3GNT2Q9NY97 397 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 CYB5R1Q9UHQ9 305 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 LRRC42Q9Y546 428 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 COMMD3-BMI1R4GMX3 469 aa20.52■□□□□ 0.88
RAB40C-212ENST00000569575 CCDC182A6NF36 153 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 WBP4O75554 376 aaKnown RBP20.51■□□□□ 0.87
RAB40C-212ENST00000569575 GOSR1O95249 250 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 CBR1P16152 277 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 ADAM8P78325 824 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 GSG1Q2KHT4 349 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 KRT80Q6KB66 452 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 SLC16A9Q7RTY1 509 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 TIGD4Q8IY51 512 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 ALDH16A1Q8IZ83 802 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 WDR31Q8NA23 367 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 ACBD4Q8NC06 268 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 BBS1Q8NFJ9 593 aa20.51■□□□□ 0.87
RAB40C-212ENST00000569575 OR51L1Q8NGJ5 315 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms