RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 OTOSQ8NHW6 89 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 CEP76Q8TAP6 659 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 UBASH3BQ8TF42 649 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 RNF166Q96A37 237 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 RFT1Q96AA3 541 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC25A36Q96CQ1 311 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 MAP6Q96JE9 813 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 Q96M66 194 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 OR14A2Q96R54 314 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 ABHD1Q96SE0 405 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 WDR77Q9BQA1 342 aaPredicted RBP6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 MARVELD1Q9BSK0 173 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 POTEKPQ9BYX7 375 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 SLITRK2Q9H156 845 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 SYT4Q9H2B2 425 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 GAREM1Q9H706 876 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 NOX4Q9NPH5 578 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 B3GAT2Q9NPZ5 323 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 FRRS1LQ9P0K9 344 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 MALT1Q9UDY8 824 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 MRM2Q9UI43 246 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF221Q9UK13 617 aa6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 NXT1Q9UKK6 140 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-209ENST00000564678 IGLV3-32A0A0A0MS00 114 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 TRBV5-5A0A0J9YX44 114 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 A0A0U1RQK1 487 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF320A2RRD8 509 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 A6NIZ1 184 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 TMEM200CA6NKL6 621 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 FAM171A2A8MVW0 826 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 FTCDNL1E5RQL4 147 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 C11orf98E9PRG8 122 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 AIPO00170 330 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 LAMTOR5O43504 91 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC43A1O75387 559 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 PAHP00439 452 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 AHCYP23526 432 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 FKBP2P26885 142 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 CLDN20P56880 219 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 NANOS3P60323 173 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 RAP1BP61224 184 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 RAP1AP62834 184 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 KCNJ8Q15842 424 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 CARTPTQ16568 116 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC25A53Q5H9E4 307 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 RSBN1Q5VWQ0 802 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF57Q68EA5 555 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 BICRALQ6AI39 1079 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 KCTD18Q6PI47 426 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 TRAT1Q6PIZ9 186 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 LYPD4Q6UWN0 246 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 DPY19L4Q7Z388 723 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 PM20D2Q8IYS1 436 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 AGBL5Q8NDL9 886 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 PIGKQ92643 395 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 DDIT4LQ96D03 193 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 NXPE2Q96DL1 559 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 PERPQ96FX8 193 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 MRGPRX4Q96LA9 322 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 FAM210AQ96ND0 272 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 DERL3Q96Q80 235 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 C7orf50Q9BRJ6 194 aaKnown RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 C1orf43Q9BWL3 253 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 TTTY10Q9BZA0 68 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 COMMD4Q9H0A8 199 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 MMP28Q9H239 520 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 WDR54Q9H977 334 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 MYOTQ9UBF9 498 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 V9GY05 133 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 MUC3AQ02505 3323 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 USP34Q70CQ2 3546 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 EXPH5Q8NEV8 1989 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 A0A1W2PPK0 400 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 OR4C45A6NMZ5 311 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 IFITM5A6NNB3 132 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 CENPXA8MT69 81 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 PRR32B1ATL7 298 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 TFECO14948 347 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 PIN1P1O15428 100 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 SULT1B1O43704 296 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 GSTZ1O43708 216 aaPredicted RBP6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 ORC5O43913 435 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 AKR7A3O95154 331 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 CER1O95813 267 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 RAB40ALP0C0E4 278 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 OR8G3PP0DMU2 310 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 CALCBP10092 127 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 PSKH1P11801 424 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC6A1P30531 599 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 FBXW4P57775 412 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 BTG1P62324 171 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 ROM1Q03395 351 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 GLO1Q04760 184 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 PUDPQ08623 228 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 MAJINQ3KP22 176 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 UBE2NLQ5JXB2 153 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC18B1Q6NT16 456 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 DNM1P34Q6PK57 102 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 GLRX5Q86SX6 157 aa6.51□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF679Q8IYX0 411 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms