RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 FAPQ12884 760 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 KCNMB1Q16558 191 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 PHYHD1Q5SRE7 291 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 ZNF813Q6ZN06 617 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 Q6ZT83 130 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 ZNF367Q7RTV3 350 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 DPPA2Q7Z7J5 298 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 CDC20BQ86Y33 519 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 SPARTQ8N0X7 666 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 OR2AJ1Q8NGZ0 328 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 OTOSQ8NHW6 89 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 HAVCR2Q8TDQ0 301 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 ZNRF4Q8WWF5 429 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 NANOS1Q8WY41 292 aaKnown RBP11.3□□□□□ -0.6
CLK3-214ENST00000564096 C11orf40Q8WZ69 217 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 RND1Q92730 232 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 FOXN4Q96NZ1 517 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 SIGLEC11Q96RL6 698 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 TBX5Q99593 518 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 WACQ9BTA9 647 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 ALG8Q9BVK2 526 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 SIAEQ9HAT2 523 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 TAS2R16Q9NYV7 291 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 OSGIN2Q9Y236 505 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 MEMO1Q9Y316 297 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 UGT2A1Q9Y4X1 527 aa11.3□□□□□ -0.6
CLK3-214ENST00000564096 J3QRE1 110 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 ZNF593O00488 134 aaPredicted RBP11.29□□□□□ -0.6
CLK3-214ENST00000564096 TOXO94900 526 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 TFP02787 698 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 HTR1AP08908 422 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 B4GALT1P15291 398 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 PCBD1P61457 104 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 PIGFQ07326 219 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 SCRN3Q0VDG4 424 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 PMPCAQ10713 525 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 AQP6Q13520 282 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 EIF2B1Q14232 305 aaKnown RBP11.29□□□□□ -0.6
CLK3-214ENST00000564096 SGCAQ16586 387 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 MEP1BQ16820 701 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 TEX30Q5JUR7 227 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 MTFR2Q6P444 385 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 TMEM154Q6P9G4 183 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 VWA1Q6PCB0 445 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
CLK3-214ENST00000564096 LYPD4Q6UWN0 246 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 BEND4Q6ZU67 534 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 DPY19L4Q7Z388 723 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 RPRMLQ8N4K4 120 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 GALNT11Q8NCW6 608 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 OR52N1Q8NH53 320 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 SNX33Q8WV41 574 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 SGCDQ92629 289 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 RORBQ92753 470 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 PLSCR4Q9NRQ2 329 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 MRPL22Q9NWU5 206 aaKnown RBP11.29□□□□□ -0.6
CLK3-214ENST00000564096 ERVK13-1Q9NX77 482 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 ZNF629Q9UEG4 869 aaPredicted RBP11.29□□□□□ -0.6
CLK3-214ENST00000564096 PRSS50Q9UI38 385 aa11.29□□□□□ -0.6
CLK3-214ENST00000564096 A0A1W2PQL4 384 aaPredicted RBP11.28□□□□□ -0.6
CLK3-214ENST00000564096 TRIM64CA6NLI5 447 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 EIF4E1BA6NMX2 242 aaKnown RBP11.28□□□□□ -0.6
CLK3-214ENST00000564096 GPANK1O95872 356 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 MT-ND5P03915 603 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 KRT8P05787 483 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 CST2P09228 141 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 OR8G3PP0DMU2 310 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 EDNRAP25101 427 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 CDAP32320 146 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 NR1H2P55055 460 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 WNT4P56705 351 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 EGR3Q06889 387 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 DBPQ10586 325 aaPredicted RBP11.28□□□□□ -0.6
CLK3-214ENST00000564096 FOXF2Q12947 444 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 MRPL28Q13084 256 aaKnown RBP11.28□□□□□ -0.6
CLK3-214ENST00000564096 GALEQ14376 348 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 IRF3Q14653 427 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 P2RY6Q15077 328 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 NEDD8Q15843 81 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 PCK2Q16822 640 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 SLC36A2Q495M3 483 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 FAM27BQ5VT28 67 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 KLHL24Q6TFL4 600 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 ZNF322Q6U7Q0 402 aaPredicted RBP11.28□□□□□ -0.6
CLK3-214ENST00000564096 PLEKHG7Q6ZR37 379 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 KCTD8Q6ZWB6 473 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 ZNF627Q7L945 461 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 SLC16A14Q7RTX9 510 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 SYS1Q8N2H4 156 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 SLC22A24Q8N4F4 322 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 NAXEQ8NCW5 288 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 C1orf162Q8NEQ5 155 aaPredicted RBP11.28□□□□□ -0.6
CLK3-214ENST00000564096 OR52N5Q8NH56 324 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 NABP1Q96AH0 204 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 STARD4Q96DR4 205 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 DMRTA2Q96SC8 542 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 C1orf198Q9H425 327 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 EMC7Q9NPA0 242 aa11.28□□□□□ -0.6
CLK3-214ENST00000564096 ACOT13Q9NPJ3 140 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms