RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 GUCA1AP43080 201 aaPredicted RBP19.42■□□□□ 0.7
LINC01960-201ENST00000563759 ZNF84P51523 738 aa19.42■□□□□ 0.7
LINC01960-201ENST00000563759 ACSM1Q08AH1 577 aa19.42■□□□□ 0.7
LINC01960-201ENST00000563759 VASH1Q7L8A9 365 aaPredicted RBP19.42■□□□□ 0.7
LINC01960-201ENST00000563759 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.42■□□□□ 0.7
LINC01960-201ENST00000563759 C11orf40Q8WZ69 217 aa19.42■□□□□ 0.7
LINC01960-201ENST00000563759 TRIB1Q96RU8 372 aa19.42■□□□□ 0.7
LINC01960-201ENST00000563759 CDADC1Q9BWV3 514 aa19.42■□□□□ 0.7
LINC01960-201ENST00000563759 RBM24Q9BX46 236 aaKnown RBP19.42■□□□□ 0.7
LINC01960-201ENST00000563759 RNF122Q9H9V4 155 aa19.42■□□□□ 0.7
LINC01960-201ENST00000563759 PARPBPQ9NWS1 579 aa19.42■□□□□ 0.7
LINC01960-201ENST00000563759 NDUFB11Q9NX14 153 aa19.42■□□□□ 0.7
LINC01960-201ENST00000563759 DHHO43323 396 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 GABARAPO95166 117 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 YES1P07947 543 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 HOXD11P31277 338 aaPredicted RBP19.41■□□□□ 0.7
LINC01960-201ENST00000563759 ZNF133P52736 654 aaPredicted RBP19.41■□□□□ 0.7
LINC01960-201ENST00000563759 BDH1Q02338 343 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 EIF2B1Q14232 305 aaKnown RBP19.41■□□□□ 0.7
LINC01960-201ENST00000563759 CNPY1Q3B7I2 92 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 PHC2Q8IXK0 858 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 Q8NA96 180 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 TTYH2Q9BSA4 534 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 ACOXLQ9NUZ1 547 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 IKZF2Q9UKS7 526 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 TMCC2O75069 709 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 UPK3AO75631 287 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 KRT8P05787 483 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 GADD45AP24522 165 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 TAS2R43P59537 309 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 PLEKHG7Q6ZR37 379 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 ZNF454Q8N9F8 522 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 DOK1Q99704 481 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 CLCF1Q9UBD9 225 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 UGT2A1Q9Y4X1 527 aa19.41■□□□□ 0.7
LINC01960-201ENST00000563759 PRR32B1ATL7 298 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 AIREO43918 545 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 KRT33AO76009 404 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 CELP19835 753 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 EGR3Q06889 387 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 TIMM50Q3ZCQ8 353 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 ADGRE4PQ86SQ3 457 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 ATCAYQ86WG3 371 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 LINC00346Q8IVM7 164 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 ASB17Q8WXJ9 295 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 HTRA1Q92743 480 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 SLCO5A1Q9H2Y9 848 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 CRLF2Q9HC73 371 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 EMC7Q9NPA0 242 aa19.4■□□□□ 0.7
LINC01960-201ENST00000563759 OR8G3PP0DMU2 310 aa19.39■□□□□ 0.7
LINC01960-201ENST00000563759 GBX2P52951 348 aaPredicted RBP19.39■□□□□ 0.7
LINC01960-201ENST00000563759 LSM3P62310 102 aaKnown RBP19.39■□□□□ 0.7
LINC01960-201ENST00000563759 TPBGQ13641 420 aa19.39■□□□□ 0.7
LINC01960-201ENST00000563759 KRTCAP3Q53RY4 240 aa19.39■□□□□ 0.7
LINC01960-201ENST00000563759 TEX30Q5JUR7 227 aa19.39■□□□□ 0.7
LINC01960-201ENST00000563759 DCXRQ7Z4W1 244 aa19.39■□□□□ 0.7
LINC01960-201ENST00000563759 RPL3LQ92901 407 aaKnown RBP19.39■□□□□ 0.7
LINC01960-201ENST00000563759 PELI1Q96FA3 418 aa19.39■□□□□ 0.7
LINC01960-201ENST00000563759 AMELYQ99218 206 aa19.39■□□□□ 0.7
LINC01960-201ENST00000563759 POLE4Q9NR33 117 aa19.39■□□□□ 0.7
LINC01960-201ENST00000563759 ZGRF1Q86YA3 2104 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 LOC100506127A0A0U1RQW1 187 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 TACSTD2P09758 323 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 PSMA1P25786 263 aaKnown RBP19.39■□□□□ 0.69
LINC01960-201ENST00000563759 CTF1Q16619 201 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 PCK2Q16822 640 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 RIPPLY2Q5TAB7 128 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 ZNF585AQ6P3V2 769 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 KCTD18Q6PI47 426 aaPredicted RBP19.39■□□□□ 0.69
LINC01960-201ENST00000563759 KCTD20Q7Z5Y7 419 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 CISD2Q8N5K1 135 aaKnown RBP19.39■□□□□ 0.69
LINC01960-201ENST00000563759 YIPF7Q8N8F6 280 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 TEX19Q8NA77 164 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 APH1AQ96BI3 265 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 BCL7BQ9BQE9 202 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 ABHD6Q9BV23 337 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 OR51E2Q9H255 320 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 NELFAQ9H3P2 528 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 GP6Q9HCN6 339 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 GRIP1Q9Y3R0 1128 aa19.39■□□□□ 0.69
LINC01960-201ENST00000563759 METTL15A6NJ78 407 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 OR6C65A6NJZ3 312 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 E9PI62 339 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 IGHV3-9P01782 118 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 MSR1P21757 451 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 AGTR1P30556 359 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 SGCAQ16586 387 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 ZNF684Q5T5D7 378 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 CORO6Q6QEF8 472 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 RPTNQ6XPR3 784 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 OR52N5Q8NH56 324 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 GMPPAQ96IJ6 420 aaPredicted RBP19.38■□□□□ 0.69
LINC01960-201ENST00000563759 CHCHD6Q9BRQ6 235 aa19.38■□□□□ 0.69
LINC01960-201ENST00000563759 MRM2Q9UI43 246 aaKnown RBP19.38■□□□□ 0.69
LINC01960-201ENST00000563759 AHRRA9YTQ3 701 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 SULT1C4O75897 302 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 ACSF3Q4G176 576 aaPredicted RBP19.37■□□□□ 0.69
LINC01960-201ENST00000563759 C19orf48Q6RUI8 117 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 SPATC1Q76KD6 591 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 FGD2Q7Z6J4 655 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms