RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ALKBH1Q13686 389 aaKnown RBP15.21■□□□□ 0.03
HDDC3-206ENST00000561036 ZNF846Q147U1 533 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 MEP1BQ16820 701 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 YIF1BQ5BJH7 314 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 CARD17Q5XLA6 110 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 OR6N1Q8NGY5 312 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 OR52N5Q8NH56 324 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 C11orf40Q8WZ69 217 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 NSMAFQ92636 917 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 ABTB1Q969K4 478 aaPredicted RBP15.21■□□□□ 0.03
HDDC3-206ENST00000561036 FOXN4Q96NZ1 517 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 ZNF385AQ96PM9 386 aaKnown RBP15.21■□□□□ 0.03
HDDC3-206ENST00000561036 SMAD5Q99717 465 aaKnown RBP15.21■□□□□ 0.03
HDDC3-206ENST00000561036 MROQ9BYG7 248 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 WDR12Q9GZL7 423 aaKnown RBP15.21■□□□□ 0.03
HDDC3-206ENST00000561036 SLC6A15Q9H2J7 730 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 ZDHHC11Q9H8X9 412 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 ELOVL3Q9HB03 270 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 AKIP1Q9NQ31 210 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 SNTG1Q9NSN8 517 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 ZNF281Q9Y2X9 895 aa15.21■□□□□ 0.03
HDDC3-206ENST00000561036 IQCMA0A1B0GVH7 501 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 EFSO43281 561 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 MPZL1O95297 269 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 S100A5P33763 92 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 CCR9P51686 369 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 RASGEF1BQ0VAM2 473 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 FOXC1Q12948 553 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 ACSM3Q53FZ2 586 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 LRFN4Q6PJG9 635 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 UNQ9370/PRO34162Q6UXP9 181 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 FOXL2NBQ6ZUU3 175 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 FCRLAQ7L513 359 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 CEACAM19Q7Z692 300 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.2■□□□□ 0.02
HDDC3-206ENST00000561036 TPRA1Q86W33 373 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 CROCCP3Q8IVE0 287 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 C20orf196Q8IYI0 205 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 SNIP1Q8TAD8 396 aaKnown RBP15.2■□□□□ 0.02
HDDC3-206ENST00000561036 RNF128Q8TEB7 428 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 BORCS5Q969J3 196 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 TMEM45BQ96B21 275 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 DCLRE1CQ96SD1 692 aaKnown RBP15.2■□□□□ 0.02
HDDC3-206ENST00000561036 AMELYQ99218 206 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 CCDC86Q9H6F5 360 aaKnown RBP15.2■□□□□ 0.02
HDDC3-206ENST00000561036 CYB5R1Q9UHQ9 305 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 FOXD3Q9UJU5 478 aaPredicted RBP15.2■□□□□ 0.02
HDDC3-206ENST00000561036 FLVCR1Q9Y5Y0 555 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 KIAA1549Q9HCM3 1950 aa15.2■□□□□ 0.02
HDDC3-206ENST00000561036 IGKV3D-15A0A087WSY6 115 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 TRAV1-2A0A0B4J238 106 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 A0A1W2PPL8 197 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 TMEM212A6NML5 194 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 PSMD9O00233 223 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 GPR171O14626 319 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 CASKO14936 926 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 KLK10O43240 276 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 SLC43A1O75387 559 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 ARL6IP5O75915 188 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 RPP14O95059 124 aaKnown RBP15.19■□□□□ 0.02
HDDC3-206ENST00000561036 SYNGR4O95473 234 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 CFL1P23528 166 aaKnown RBP15.19■□□□□ 0.02
HDDC3-206ENST00000561036 RPS27P42677 84 aaKnown RBP15.19■□□□□ 0.02
HDDC3-206ENST00000561036 RIDAP52758 137 aaKnown RBP15.19■□□□□ 0.02
HDDC3-206ENST00000561036 NANOS3P60323 173 aaKnown RBP15.19■□□□□ 0.02
HDDC3-206ENST00000561036 LSM6P62312 80 aaKnown RBP15.19■□□□□ 0.02
HDDC3-206ENST00000561036 IGFL3Q6UXB1 125 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 RHOUQ7L0Q8 258 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 KRT77Q7Z794 578 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 OR2G2Q8NGZ5 317 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 ST7LQ8TDW4 575 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 AP3S1Q92572 193 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 THRSPQ92748 146 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 MAP6Q96JE9 813 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 DCBLD2Q96PD2 775 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 BARHL1Q9BZE3 327 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 PALMDQ9NP74 551 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 ING1Q9UK53 422 aaPredicted RBP15.19■□□□□ 0.02
HDDC3-206ENST00000561036 SSUH2Q9Y2M2 353 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 UGT2A1Q9Y4X1 527 aa15.19■□□□□ 0.02
HDDC3-206ENST00000561036 MYL9P24844 172 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 DCTDP32321 178 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 GUCA1AP43080 201 aaPredicted RBP15.18■□□□□ 0.02
HDDC3-206ENST00000561036 RPS11P62280 158 aaKnown RBP eCLIP15.18■□□□□ 0.02
HDDC3-206ENST00000561036 HNRNPA0Q13151 305 aaKnown RBP15.18■□□□□ 0.02
HDDC3-206ENST00000561036 ZMAT1Q5H9K5 638 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 LRRN1Q6UXK5 716 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 LRRC69Q6ZNQ3 347 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 DCXRQ7Z4W1 244 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 OR5AK2Q8NH90 309 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 RNF133Q8WVZ7 376 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 ROBO4Q8WZ75 1007 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 C4orf45Q96LM5 186 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 C6orf62Q9GZU0 229 aaPredicted RBP15.18■□□□□ 0.02
HDDC3-206ENST00000561036 COMMD4Q9H0A8 199 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 C1orf198Q9H425 327 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 SEC61A2Q9H9S3 476 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 RNF122Q9H9V4 155 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 POLE4Q9NR33 117 aa15.18■□□□□ 0.02
HDDC3-206ENST00000561036 FRRS1LQ9P0K9 344 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms