RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 CTLA4P16410 223 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 ZNF3P17036 446 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 SPI1P17947 270 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 COX5AP20674 150 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 AGAP20933 346 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 CRABP1P29762 137 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 HTR1FP30939 366 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 BLVRAP53004 296 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 MRPS34P82930 218 aaKnown RBP4.81□□□□□ -1.64
ZEB1-220ENST00000560909 IL1RL1Q01638 556 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 TLE1Q04724 770 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 FOXF2Q12947 444 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 MELKQ14680 651 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 HSPB2Q16082 182 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 PHYHD1Q5SRE7 291 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 TSPO2Q5TGU0 170 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 RNLSQ5VYX0 342 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 FBXW9Q5XUX1 488 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 NIPAL3Q6P499 406 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 UGT2A3Q6UWM9 527 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 Q6ZT83 130 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 MEPCEQ7L2J0 689 aaKnown RBP4.81□□□□□ -1.64
ZEB1-220ENST00000560909 CXXC5Q7LFL8 322 aaKnown RBP4.81□□□□□ -1.64
ZEB1-220ENST00000560909 GPAT4Q86UL3 456 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 GID4Q8IVV7 300 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 TIGD4Q8IY51 512 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 NOXO1Q8NFA2 376 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 SLC26A10Q8NG04 563 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 OR2T4Q8NH00 348 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 FAM81AQ8TBF8 368 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 ZNRF4Q8WWF5 429 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 MCHR2Q969V1 340 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 Q96MT0 163 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 RBP7Q96R05 134 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 IL4I1Q96RQ9 567 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 TEAD3Q99594 435 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 ZNF649Q9BS31 505 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 WACQ9BTA9 647 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 EMC6Q9BV81 110 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 JAM3Q9BX67 310 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 PRRG4Q9BZD6 226 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 NUAK2Q9H093 628 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 SYT4Q9H2B2 425 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 SLCO5A1Q9H2Y9 848 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 PIGMQ9H3S5 423 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 Q9H521 79 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 GPR35Q9HC97 309 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 SLC7A10Q9NS82 523 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 ASB6Q9NWX5 421 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 IMPAD1Q9NX62 359 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 Q9UFV3 132 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 WARS2Q9UGM6 360 aaKnown RBP4.81□□□□□ -1.64
ZEB1-220ENST00000560909 PSORS1C1Q9UIG5 152 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 EXOGQ9Y2C4 368 aaKnown RBP4.81□□□□□ -1.64
ZEB1-220ENST00000560909 LRCH1Q9Y2L9 728 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 NOSIPQ9Y314 301 aaKnown RBP4.81□□□□□ -1.64
ZEB1-220ENST00000560909 EMC9Q9Y3B6 208 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 PCDHGB5Q9Y5G0 923 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 COL12A1Q99715 3063 aa4.81□□□□□ -1.64
ZEB1-220ENST00000560909 CACNA1CQ13936 2221 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 RTTNQ86VV8 2226 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 DIDO1Q9BTC0 2240 aaKnown RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 A0A1B0GUH1 482 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 CLEC18AA5D8T8 446 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 SLC22A31A6NKX4 558 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 FAM183AA6NL82 134 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 TRIM64CA6NLI5 447 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 A8MXE2 369 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 M0R129 80 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 SLC16A7O60669 478 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 MRPS14O60783 128 aaKnown RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 KHDRBS3O75525 346 aaKnown RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 GLCEO94923 617 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 RENP00797 406 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 TFP02787 698 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 SCG5P05408 212 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 QDPRP09417 244 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 PSMB1P20618 241 aaKnown RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 PAICSP22234 425 aaKnown RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 CRHBPP24387 322 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 MPGP29372 298 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 CSNK1A1P48729 337 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 CASP6P55212 293 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 SH3BGRP55822 239 aaPredicted RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 LSM6P62312 80 aaKnown RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 HIST1H3AP68431 136 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 SLC35A2P78381 396 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 HSF2Q03933 536 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 LGALS3BPQ08380 585 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 PMPCAQ10713 525 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 MRPL49Q13405 166 aaKnown RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 TOP3AQ13472 1001 aaPredicted RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 MED21Q13503 144 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 CAMK2DQ13557 499 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 P2RY6Q15077 328 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 ETFDHQ16134 617 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 RBM48Q5RL73 367 aaKnown RBP4.8□□□□□ -1.64
ZEB1-220ENST00000560909 HIST2H3PS2Q5TEC6 136 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 FAM27BQ5VT28 67 aa4.8□□□□□ -1.64
ZEB1-220ENST00000560909 MTFR2Q6P444 385 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms