RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 DNPH1O43598 174 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 FAM20BO75063 409 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 SS18L1O75177 396 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 TNFSF13O75888 250 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 ZNF432O94892 652 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 IGHG1P01857 330 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 TFP02787 698 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 QDPRP09417 244 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 PRR23D2P0DMB1 279 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 GLI4P10075 376 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 ZNF3P17036 446 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 SPI1P17947 270 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 SLC2A5P22732 501 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 FKBP2P26885 142 aaKnown RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 CSNK1A1P48729 337 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 DAP3P51398 398 aaKnown RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 CDH11P55287 796 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 TUBA1BP68363 451 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 TUBA4AP68366 448 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 PMPCAQ10713 525 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 GTF3C1Q12789 2109 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 APOFQ13790 326 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 GUSBP1Q15486 140 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 CDSNQ15517 529 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 EIF2S3LQ2VIR3 472 aaKnown RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 KRTCAP3Q53RY4 240 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 FREM1Q5H8C1 2179 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 TSPO2Q5TGU0 170 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 NSUN5P2Q63ZY6 315 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 GTF2IRD2BQ6EKJ0 949 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 KRT80Q6KB66 452 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 UGT2A3Q6UWM9 527 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 B3GNT6Q6ZMB0 384 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 TUBA1AQ71U36 451 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 SPATC1Q76KD6 591 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 SSX6Q7RTT6 188 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 GTF2IRD2Q86UP8 949 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 FJX1Q86VR8 437 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 LIX1LQ8IVB5 337 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 RP1L1Q8IWN7 2480 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 MCEMP1Q8IX19 187 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 OR6V1Q8N148 313 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 ZNF843Q8N446 348 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 LINC01356Q8N9X3 169 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 PROKR2Q8NFJ6 384 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 OR4F15Q8NGB8 312 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 OR51G2Q8NGK0 314 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 OR6K6Q8NGW6 343 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 OR6N1Q8NGY5 312 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 OR6X1Q8NH79 312 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 RHOXF1Q8NHV9 184 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 MBD3L2Q8NHZ7 208 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 TMEM54Q969K7 222 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 MCHR2Q969V1 340 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 NMD3Q96D46 503 aaKnown RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 ANAPC16Q96DE5 110 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 SLC38A2Q96QD8 506 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 APOL4Q9BPW4 351 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 TTYH2Q9BSA4 534 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 MRPL13Q9BYD1 178 aaKnown RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 NMNAT2Q9BZQ4 307 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 WDR76Q9H967 626 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 EMC7Q9NPA0 242 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 FANCFQ9NPI8 374 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 SLC7A10Q9NS82 523 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 VSX1Q9NZR4 365 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 KLHL9Q9P2J3 617 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 ERVK-18Q9QC07 812 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 Q9UFV3 132 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 KLHL21Q9UJP4 597 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 COPS3Q9UNS2 423 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 COA3Q9Y2R0 106 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 KLHDC2Q9Y2U9 406 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 ZNF175Q9Y473 711 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 NOX1Q9Y5S8 564 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 HTR3EA5X5Y0 456 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 ZNF726A6NNF4 738 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 AHRRA9YTQ3 701 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 PTGES3LE9PB15 166 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 PSMD9O00233 223 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 LRRTM2O43300 516 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 WDR1O75083 606 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 SLC43A1O75387 559 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 MRPL33O75394 65 aaKnown RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 RENP00797 406 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 IFNGP01579 166 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 MT-ND2P03891 347 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 HMGN1P05114 100 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 YES1P07947 543 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 HTR1AP08908 422 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 PATE4P0C8F1 98 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 RNF224P0DH78 156 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 SMIM18P0DKX4 95 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 TMIGD3P0DMS9 266 aaPredicted RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 GAAP10253 952 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 DBTP11182 482 aaKnown RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 SFTPCP11686 197 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 APEHP13798 732 aaKnown RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 B4GALT1P15291 398 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 BMP5P22003 454 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms