RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 CPT1CQ8TCG5 803 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 TMIGD2Q96BF3 282 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 GPR35Q9HC97 309 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 TMEM14AQ9Y6G1 99 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 DPPA5A6NC42 116 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 ZNF670-ZNF695F2Z2N8 137 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 RPL36A-HNRNPH2H7BZ11 118 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 SLC19A2O60779 497 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 ALOX5APP20292 161 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 CD79BP40259 229 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 RPS27P42677 84 aaKnown RBP10.75□□□□□ -0.69
HERC1-205ENST00000559886 OR3A2P47893 321 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 ZNF84P51523 738 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 GP2P55259 537 aaKnown RBP10.75□□□□□ -0.69
HERC1-205ENST00000559886 WNT4P56705 351 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 DOC2BQ14184 412 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 RAB39AQ14964 217 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 MED22Q15528 200 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.75□□□□□ -0.69
HERC1-205ENST00000559886 SATL1Q86VE3 508 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 DOLPP1Q86YN1 238 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 ZNF100Q8IYN0 542 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 KLHL36Q8N4N3 616 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 COG8Q96MW5 612 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 TP63Q9H3D4 680 aaPredicted RBP10.75□□□□□ -0.69
HERC1-205ENST00000559886 POLE4Q9NR33 117 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 LAMP5Q9UJQ1 280 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 KLHDC2Q9Y2U9 406 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 EMC9Q9Y3B6 208 aa10.75□□□□□ -0.69
HERC1-205ENST00000559886 KRT33AO76009 404 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 IGHV3-9P01782 118 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 SPARCP09486 303 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 TIMP3P35625 211 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 GUCA1AP43080 201 aaPredicted RBP10.74□□□□□ -0.69
HERC1-205ENST00000559886 KIR2DL2P43627 348 aaPredicted RBP10.74□□□□□ -0.69
HERC1-205ENST00000559886 MRPS34P82930 218 aaKnown RBP10.74□□□□□ -0.69
HERC1-205ENST00000559886 ROR2Q01974 943 aaKnown RBP10.74□□□□□ -0.69
HERC1-205ENST00000559886 STK11Q15831 433 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 ZNF322Q6U7Q0 402 aaPredicted RBP10.74□□□□□ -0.69
HERC1-205ENST00000559886 TMPRSS11AQ6ZMR5 421 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 NABP1Q96AH0 204 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 NELFAQ9H3P2 528 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 C12orf49Q9H741 205 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 KCNG2Q9UJ96 466 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 SEC14L2O76054 403 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 TOXO94900 526 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 PSMB9P28065 219 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 RBPJQ06330 500 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 ST3GAL2Q16842 350 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 CEACAM16Q2WEN9 425 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 CDONQ4KMG0 1287 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 ZNF454Q8N9F8 522 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 OR10H5Q8NGA6 315 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 OR13F1Q8NGS4 319 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 MGLLQ99685 303 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 ISG20L2Q9H9L3 353 aaKnown RBP10.74□□□□□ -0.69
HERC1-205ENST00000559886 EMC7Q9NPA0 242 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 CYB5R1Q9UHQ9 305 aa10.74□□□□□ -0.69
HERC1-205ENST00000559886 CACNA1BQ00975 2339 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 A6NHS1 94 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 ZNF587BE7ETH6 402 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 PHYHO14832 338 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 TMCC2O75069 709 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 CRHP06850 196 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 MSR1P21757 451 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 LSM6P62312 80 aaKnown RBP10.73□□□□□ -0.69
HERC1-205ENST00000559886 ACTA2P62736 377 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 ACTG2P63267 376 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 TIGD6Q17RP2 521 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 ZNF684Q5T5D7 378 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 SLC18B1Q6NT16 456 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 GPR141Q7Z602 305 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 SYS1Q8N2H4 156 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 RPRMLQ8N4K4 120 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 OR6K3Q8NGY3 331 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 SPRYD4Q8WW59 207 aaPredicted RBP10.73□□□□□ -0.69
HERC1-205ENST00000559886 GATAD2BQ8WXI9 593 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 HTRA1Q92743 480 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 MRPL48Q96GC5 212 aaKnown RBP10.73□□□□□ -0.69
HERC1-205ENST00000559886 ZFP3Q96NJ6 502 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 MYCBPQ99417 103 aaPredicted RBP10.73□□□□□ -0.69
HERC1-205ENST00000559886 CDADC1Q9BWV3 514 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 TMEM38BQ9NVV0 291 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 UPB1Q9UBR1 384 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 MALT1Q9UDY8 824 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 PRSS50Q9UI38 385 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 PRR32B1ATL7 298 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 NPR2P20594 1047 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 TTKP33981 857 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 PER3P56645 1201 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 OR12D2P58182 307 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 SIRPAP78324 504 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 EGR3Q06889 387 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 FOXF2Q12947 444 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 SGCAQ16586 387 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 EIF2S3LQ2VIR3 472 aaKnown RBP10.73□□□□□ -0.69
HERC1-205ENST00000559886 FAM27BQ5VT28 67 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 FBXW9Q5XUX1 488 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 TFAP2EQ6VUC0 442 aa10.73□□□□□ -0.69
HERC1-205ENST00000559886 C3P1Q6ZMU1 363 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms