RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 BTBD10Q9BSF8 475 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 MRPL37Q9BZE1 423 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 NDEL1Q9GZM8 345 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 SYT4Q9H2B2 425 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 PLK3Q9H4B4 646 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 MAGIXQ9H6Y5 334 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 CDH20Q9HBT6 801 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 BARX1Q9HBU1 254 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 MYEF2Q9P2K5 600 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 U3KQV3 271 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 IQCMA0A1B0GVH7 501 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 SLC16A7O60669 478 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 ENTPD5O75356 428 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 MPZL1O95297 269 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 IGFBP1P08833 259 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 BMP4P12644 408 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 NR2C1P13056 603 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 CCNOP22674 350 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 EFNA4P52798 201 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 PSG4Q00888 419 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 PLP2Q04941 152 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 ENDOGQ14249 297 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 MAD2L1BPQ15013 274 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 RFX4Q33E94 735 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 ALKBH6Q3KRA9 238 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 FAM27BQ5VT28 67 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 C1orf94Q6P1W5 598 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 FOXL2NBQ6ZUU3 175 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 ADGRG5Q8IZF4 528 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 ICA1LQ8NDH6 482 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 DOK1Q99704 481 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 IFT27Q9BW83 186 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 ZNF416Q9BWM5 594 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 REG4Q9BYZ8 158 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 WNT5BQ9H1J7 359 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 KCNN2Q9H2S1 579 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 TPK1Q9H3S4 243 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 FN3KQ9H479 309 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 POLE4Q9NR33 117 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 FBXL3Q9UKT7 428 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 COA3Q9Y2R0 106 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 CMAHPQ9Y471 501 aa12.78□□□□□ -0.36
RABGGTA-211ENST00000559850 LOC100509620A0A075B734 347 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 DCTN6O00399 190 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 CCNB2O95067 398 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 GASTP01350 101 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 CST2P09228 141 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 MSR1P21757 451 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 SLC6A6P31641 620 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 GLRXP35754 106 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 IFNGR2P38484 337 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 CENPAP49450 140 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 RPS6KA3P51812 740 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 TSPAN31Q12999 210 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 CARTPTQ16568 116 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 TBC1D28Q2M2D7 210 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 FAM98BQ52LJ0 330 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 CLEC12AQ5QGZ9 265 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 SLC35F1Q5T1Q4 408 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 GPR139Q6DWJ6 353 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 ZNF770Q6IQ21 691 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 ZNF774Q6NX45 483 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 DPPA2Q7Z7J5 298 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 OR4K13Q8NH42 304 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 FNDC8Q8TC99 324 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 MRPL24Q96A35 216 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 PLA2G12AQ9BZM1 189 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 OR2H1Q9GZK4 316 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 NUAK2Q9H093 628 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 DYNLRB1Q9NP97 96 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 VSX1Q9NZR4 365 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 SLC7A8Q9UHI5 535 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 DUSP13Q9UII6 198 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 SAMHD1Q9Y3Z3 626 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 SPEF1Q9Y4P9 236 aa12.77□□□□□ -0.37
RABGGTA-211ENST00000559850 FAM171A2A8MVW0 826 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 KHDRBS3O75525 346 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 KRT36O76013 467 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 STAMBPO95630 424 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 TXNDC12O95881 172 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 CLPTM1O96005 669 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 LCKP06239 509 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 ADRA2AP08913 450 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 HIST1H1CP16403 213 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 STOMP27105 288 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 APLNRP35414 380 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 ALDH3B1P43353 468 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 HMGA2P52926 109 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 MEP1BQ16820 701 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 DNAL1Q4LDG9 190 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 OR2T5Q6IEZ7 315 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 LEG1Q6P5S2 330 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 PGM2L1Q6PCE3 622 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 ZNF620Q6ZNG0 422 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 AQP11Q8NBQ7 271 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 OR8D4Q8NGM9 314 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 OR2T29Q8NH02 315 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms