RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TSSK2Q96PF2 358 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 SH3GL3Q99963 347 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 NUAK2Q9H093 628 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 OAZ3Q9UMX2 235 aa13.5□□□□□ -0.25
LINC01220-201ENST00000558575 SAC3D1A6NKF1 404 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 EPHA2P29317 976 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 MRPS34P82930 218 aaKnown RBP13.49□□□□□ -0.25
LINC01220-201ENST00000558575 CDK5Q00535 292 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 C1QTNF12Q5T7M4 302 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 ADCK1Q86TW2 530 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 OR6V1Q8N148 313 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 SVOPLQ8N434 492 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 ICA1LQ8NDH6 482 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 OR52L1Q8NGH7 329 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 FNDC8Q8TC99 324 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 ZNRF4Q8WWF5 429 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 SNX18Q96RF0 628 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 TMEM204Q9BSN7 226 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 ZNF556Q9HAH1 456 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 OBP2BQ9NPH6 170 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 TBC1D23Q9NUY8 699 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 CRNNQ9UBG3 495 aaPredicted RBP13.49□□□□□ -0.25
LINC01220-201ENST00000558575 B9D1Q9UPM9 204 aa13.49□□□□□ -0.25
LINC01220-201ENST00000558575 IGLV1-36A0A0B4J1U3 117 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 H3BN98 237 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 SLC16A7O60669 478 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 CELA3BP08861 270 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 OR8G3PP0DMU2 310 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 CBR1P16152 277 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 POU1F1P28069 291 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 ZNF84P51523 738 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 UBE2NP61088 152 aaKnown RBP13.48□□□□□ -0.25
LINC01220-201ENST00000558575 PIGFQ07326 219 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 BSPH1Q075Z2 132 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC01220-201ENST00000558575 GINS1Q14691 196 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 PGGHGQ32M88 737 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 NRN1LQ496H8 165 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 TMEM236Q5W0B7 351 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 OTPQ5XKR4 325 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 LEG1Q6P5S2 330 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 UGT2A3Q6UWM9 527 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 SSX8Q7RTT4 187 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 MDP1Q86V88 176 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 MYPOPQ86VE0 399 aaPredicted RBP13.48□□□□□ -0.25
LINC01220-201ENST00000558575 CCDC36Q8IYA8 594 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 PQLC1Q8N2U9 271 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 PARP8Q8N3A8 854 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 FAM169BQ8N8A8 192 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 CYB561A3Q8NBI2 242 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 SDR9C7Q8NEX9 313 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 OR2T33Q8NG76 320 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 LILRB1Q8NHL6 650 aaPredicted RBP13.48□□□□□ -0.25
LINC01220-201ENST00000558575 FOXN4Q96NZ1 517 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 OSBPL10Q9BXB5 764 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 FN3KQ9H479 309 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 SEC61A2Q9H9S3 476 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 SIAEQ9HAT2 523 aa13.48□□□□□ -0.25
LINC01220-201ENST00000558575 SRA1Q9HD15 236 aaKnown RBP13.48□□□□□ -0.25
LINC01220-201ENST00000558575 PAPOLBQ9NRJ5 636 aaKnown RBP13.48□□□□□ -0.25
LINC01220-201ENST00000558575 COA3Q9Y2R0 106 aaPredicted RBP13.48□□□□□ -0.25
LINC01220-201ENST00000558575 IGHV1-18A0A0C4DH31 117 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 M0R1B8 84 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 KHDRBS3O75525 346 aaKnown RBP13.47□□□□□ -0.25
LINC01220-201ENST00000558575 GOSR1O95249 250 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 MPZL1O95297 269 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 GPANK1O95872 356 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 WNT11O96014 354 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 IGKV3-15P01624 115 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 IGLV1-44P01699 117 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 NR2C1P13056 603 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 CD40P25942 277 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 NOS3P29474 1203 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 POLR2IP36954 125 aaKnown RBP13.47□□□□□ -0.25
LINC01220-201ENST00000558575 CRISP1P54107 249 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 KRTAP1-1Q07627 177 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 SGCAQ16586 387 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 FAM27BQ5VT28 67 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 ZBTB46Q86UZ6 589 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 LRRC75A-AS1Q8N1F1 130 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 SLC37A3Q8NCC5 494 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 TEX47Q8TBZ9 253 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 DNAJC9Q8WXX5 260 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 NEUROG1Q92886 237 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 SLC29A1Q99808 456 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 RBM4Q9BWF3 364 aaKnown RBP13.47□□□□□ -0.25
LINC01220-201ENST00000558575 NMNAT2Q9BZQ4 307 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 NGBQ9NPG2 151 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 BAIAP2Q9UQB8 552 aa13.47□□□□□ -0.25
LINC01220-201ENST00000558575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC01220-201ENST00000558575 F12P00748 615 aaPredicted RBP13.46□□□□□ -0.25
LINC01220-201ENST00000558575 MMP7P09237 267 aaPredicted RBP13.46□□□□□ -0.25
LINC01220-201ENST00000558575 NPR2P20594 1047 aa13.46□□□□□ -0.25
LINC01220-201ENST00000558575 LAP3P28838 519 aa13.46□□□□□ -0.25
LINC01220-201ENST00000558575 GRK5P34947 590 aa13.46□□□□□ -0.25
LINC01220-201ENST00000558575 CAPZA2P47755 286 aa13.46□□□□□ -0.25
LINC01220-201ENST00000558575 RAB1AP62820 205 aa13.46□□□□□ -0.25
LINC01220-201ENST00000558575 SPOCK1Q08629 439 aa13.46□□□□□ -0.25
LINC01220-201ENST00000558575 CRMP1Q14194 572 aa13.46□□□□□ -0.25
LINC01220-201ENST00000558575 ENDOGQ14249 297 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms