RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SGCAQ16586 387 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 HIST2H2BCQ6DN03 193 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 ZNF704Q6ZNC4 412 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-234ENST00000557703 MDP1Q86V88 176 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 OR6V1Q8N148 313 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 ZNF611Q8N823 705 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 ICA1LQ8NDH6 482 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 NSMAFQ92636 917 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 PLEKHA8Q96JA3 519 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 ZNF75AQ96N20 296 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 RDH12Q96NR8 316 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 NMNAT2Q9BZQ4 307 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 SEMA6AQ9H2E6 1030 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 DCLRE1BQ9H816 532 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 RNF121Q9H920 327 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 ZNF224Q9NZL3 707 aa11.92□□□□□ -0.5
SHMT2-234ENST00000557703 ANKRD17O75179 2603 aaKnown RBP11.92□□□□□ -0.5
SHMT2-234ENST00000557703 IGKV1D-43A0A0B4J1Z2 117 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 OR6C68A6NDL8 312 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 M0R1B8 84 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 ABCD4O14678 606 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 HS3ST1O14792 307 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 PRODHO43272 600 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 SNAP29O95721 258 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 HLA-HP01893 362 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 ALPLP05186 524 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 MMP7P09237 267 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-234ENST00000557703 ZNF14P17017 642 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-234ENST00000557703 TUBG1P23258 451 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 POU1F1P28069 291 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 NPRL3Q12980 569 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 DAG1Q14118 895 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 PTGES3Q15185 160 aaKnown RBP11.91□□□□□ -0.5
SHMT2-234ENST00000557703 ZNF672Q499Z4 452 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-234ENST00000557703 SLC35D3Q5M8T2 416 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 SLC35F1Q5T1Q4 408 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 ZNF544Q6NX49 715 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 SLC22A25Q6T423 547 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 SLC37A3Q8NCC5 494 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 NUP37Q8NFH4 326 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 GJC3Q8NFK1 279 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 TRUB1Q8WWH5 349 aaKnown RBP11.91□□□□□ -0.5
SHMT2-234ENST00000557703 PIGTQ969N2 578 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 LURAP1Q96LR2 239 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 GABARAPL3Q9BY60 117 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 RPRD1BQ9NQG5 326 aaKnown RBP11.91□□□□□ -0.5
SHMT2-234ENST00000557703 TUBG2Q9NRH3 451 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 COA3Q9Y2R0 106 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-234ENST00000557703 RTTNQ86VV8 2226 aa11.91□□□□□ -0.5
SHMT2-234ENST00000557703 IGHV1-18A0A0C4DH31 117 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 A0A1W2PPL8 197 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 A0A1W2PR80 420 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 ZAR1LA6NP61 321 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 H7C1C5 153 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 SURF4O15260 269 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 CECR9P0C854 216 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 PCSK6P29122 969 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 FMO3P31513 532 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 CDAP32320 146 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 LCN6P62502 163 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 NAAAQ02083 359 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 TEX30Q5JUR7 227 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 ALKBH2Q6NS38 261 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 ARL9Q6T311 187 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 ZBTB49Q6ZSB9 765 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 RHOUQ7L0Q8 258 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 PACRGLQ8N7B6 248 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 SDR9C7Q8NEX9 313 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 OR10H5Q8NGA6 315 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 OR4Q3Q8NH05 313 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 FBXW5Q969U6 566 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 EME1Q96AY2 570 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 SH3GL3Q99963 347 aa11.9□□□□□ -0.5
SHMT2-234ENST00000557703 SRA1Q9HD15 236 aaKnown RBP11.9□□□□□ -0.5
SHMT2-234ENST00000557703 TMEFF2Q9UIK5 374 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-234ENST00000557703 NDRG4Q9ULP0 352 aaKnown RBP11.9□□□□□ -0.5
SHMT2-234ENST00000557703 POLQO75417 2590 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 CREBBPQ92793 2442 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 SHISA9B4DS77 424 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 PRR23D1E9PI22 279 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-234ENST00000557703 J3QW42 95 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 ICMTO60725 284 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 SEC14L2O76054 403 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 PRR23D2P0DMB1 279 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-234ENST00000557703 BMP4P12644 408 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 APLNRP35414 380 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 RPS23P62266 143 aaKnown RBP11.89□□□□□ -0.51
SHMT2-234ENST00000557703 ECH1Q13011 328 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 CRMP1Q14194 572 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 ETFDHQ16134 617 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 SNAPC1Q16533 368 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 TBC1D28Q2M2D7 210 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 SLX4IPQ5VYV7 408 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 ACSM5Q6NUN0 579 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-234ENST00000557703 LRRC18Q8N456 261 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 PROKR2Q8NFJ6 384 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 SLC26A10Q8NG04 563 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 MBD6Q96DN6 1003 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 CIB1Q99828 191 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms