RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 BOD1Q96IK1 185 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 VCX3BQ9H321 246 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 SIAEQ9HAT2 523 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 CRIM1Q9NZV1 1036 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 SLC25A15Q9Y619 301 aa13.36□□□□□ -0.27
NEDD1-213ENST00000557644 HLA-DQA2P01906 255 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 NPR2P20594 1047 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 KEAP1Q14145 624 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 C6orf52Q5T4I8 152 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
NEDD1-213ENST00000557644 ENTHD1Q8IYW4 607 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 C17orf78Q8N4C9 275 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 SLC26A10Q8NG04 563 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 OR8J1Q8NGP2 316 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 NOX3Q9HBY0 568 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 MRPL22Q9NWU5 206 aaKnown RBP13.35□□□□□ -0.27
NEDD1-213ENST00000557644 PTPN13Q12923 2485 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 MSR1P21757 451 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 SLC2A5P22732 501 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 HOXC12P31275 282 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 VHLP40337 213 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 RPS27P42677 84 aaKnown RBP13.35□□□□□ -0.27
NEDD1-213ENST00000557644 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
NEDD1-213ENST00000557644 UBE2NP61088 152 aaKnown RBP13.35□□□□□ -0.27
NEDD1-213ENST00000557644 HSF2Q03933 536 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 APOFQ13790 326 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 AADACL4Q5VUY2 407 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 SEZ6L2Q6UXD5 910 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 MEX3BQ6ZN04 569 aaKnown RBP13.35□□□□□ -0.27
NEDD1-213ENST00000557644 WFDC8Q8IUA0 241 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 ZMYND19Q96E35 227 aaPredicted RBP13.35□□□□□ -0.27
NEDD1-213ENST00000557644 FBXO17Q96EF6 278 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF416Q9BWM5 594 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 OR10A4Q9H209 315 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 DNAJC27Q9NZQ0 273 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 NDRG3Q9UGV2 375 aa13.35□□□□□ -0.27
NEDD1-213ENST00000557644 PKDREJQ9NTG1 2253 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 CD79AP11912 226 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 CAPGP40121 348 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 KIR2DL3P43628 341 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 ENDOGQ14249 297 aaKnown RBP13.34□□□□□ -0.27
NEDD1-213ENST00000557644 PPA1Q15181 289 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 NRN1LQ496H8 165 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 FAM27BQ5VT28 67 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 TTC23Q5W5X9 447 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 SLC16A14Q7RTX9 510 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 ACBD4Q8NC06 268 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 HSD17B8Q92506 261 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 TFAP2CQ92754 450 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 MUCL1Q96DR8 90 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 WDR76Q9H967 626 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 NPAP1Q9NZP6 1156 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 FARS2O95363 451 aaKnown RBP13.34□□□□□ -0.27
NEDD1-213ENST00000557644 PSKH1P11801 424 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 GABRB1P18505 474 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 RPS7P62081 194 aaKnown RBP13.34□□□□□ -0.27
NEDD1-213ENST00000557644 TEKQ02763 1124 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 SNCBQ16143 134 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 ZNF691Q5VV52 312 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 SP5Q6BEB4 398 aaPredicted RBP13.34□□□□□ -0.27
NEDD1-213ENST00000557644 MDP1Q86V88 176 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 P2RY8Q86VZ1 359 aa13.34□□□□□ -0.27
NEDD1-213ENST00000557644 NBPF19A0A087WUL8 3843 aa13.33□□□□□ -0.28
NEDD1-213ENST00000557644 CCDC182A6NF36 153 aa13.33□□□□□ -0.28
NEDD1-213ENST00000557644 H0YJX3 145 aa13.33□□□□□ -0.28
NEDD1-213ENST00000557644 GLCEO94923 617 aa13.33□□□□□ -0.28
NEDD1-213ENST00000557644 PPP3CBP16298 524 aa13.33□□□□□ -0.28
NEDD1-213ENST00000557644 NXNL2Q5VZ03 156 aa13.33□□□□□ -0.28
NEDD1-213ENST00000557644 TRUB1Q8WWH5 349 aaKnown RBP13.33□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF582Q96NG8 517 aaPredicted RBP13.33□□□□□ -0.28
NEDD1-213ENST00000557644 TEAD3Q99594 435 aa13.33□□□□□ -0.28
NEDD1-213ENST00000557644 B3GNT2Q9NY97 397 aa13.33□□□□□ -0.28
NEDD1-213ENST00000557644 COMMD3-BMI1R4GMX3 469 aa13.33□□□□□ -0.28
NEDD1-213ENST00000557644 ARPC4-TTLL3A0A0A6YYG9 625 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 H0YAE9 185 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 PRODHO43272 600 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 ENTPD6O75354 484 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 FMO3P31513 532 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 IL5RAQ01344 420 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 HIST2H2BCQ6DN03 193 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 CORO6Q6QEF8 472 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 DEPDC4Q8N2C3 294 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 RHOXF1Q8NHV9 184 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 SMAP2Q8WU79 429 aaPredicted RBP13.32□□□□□ -0.28
NEDD1-213ENST00000557644 DACH2Q96NX9 599 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 APOL4Q9BPW4 351 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 USB1Q9BQ65 265 aaKnown RBP13.32□□□□□ -0.28
NEDD1-213ENST00000557644 ASH2LQ9UBL3 628 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 PLEKHB1Q9UF11 243 aaPredicted RBP13.32□□□□□ -0.28
NEDD1-213ENST00000557644 AMDHD2Q9Y303 409 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 CELA3BP08861 270 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 MMP7P09237 267 aaPredicted RBP13.32□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF32P17041 273 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 GSTT1P30711 240 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF83P51522 516 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 SNRPGP62308 76 aaKnown RBP13.32□□□□□ -0.28
NEDD1-213ENST00000557644 RAB1AP62820 205 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 KCNMB1Q16558 191 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 GSG1Q2KHT4 349 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 MYPOPQ86VE0 399 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms