RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 IL20RAQ9UHF4 553 aa10.83□□□□□ -0.68
SLIRP-211ENST00000557623 SLC7A8Q9UHI5 535 aa10.83□□□□□ -0.68
SLIRP-211ENST00000557623 FBXO9Q9UK97 447 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-211ENST00000557623 UGT2A1Q9Y4X1 527 aa10.83□□□□□ -0.68
SLIRP-211ENST00000557623 U3KQV3 271 aa10.83□□□□□ -0.68
SLIRP-211ENST00000557623 ARID1AO14497 2285 aa10.83□□□□□ -0.68
SLIRP-211ENST00000557623 A0A1W2PPL8 197 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 H7C1C5 153 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 KHDRBS3O75525 346 aaKnown RBP10.82□□□□□ -0.68
SLIRP-211ENST00000557623 PPP1R3DO95685 299 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 GASTP01350 101 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 CST2P09228 141 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 PATE4P0C8F1 98 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 ZNF35P13682 527 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 GSTM3P21266 225 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 MSR1P21757 451 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 NOS3P29474 1203 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 CRABP1P29762 137 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 CDAP32320 146 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 PCBD1P61457 104 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 LCN6P62502 163 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 GALK2Q01415 458 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 HSF2Q03933 536 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 DAG1Q14118 895 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 ETFDHQ16134 617 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 C11orf71Q6IPW1 123 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 ZNF770Q6IQ21 691 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-211ENST00000557623 DNM1P34Q6PK57 102 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 RASSF6Q6ZTQ3 369 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 YTHDF3Q7Z739 585 aaKnown RBP10.82□□□□□ -0.68
SLIRP-211ENST00000557623 JAZF1Q86VZ6 243 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 AQP11Q8NBQ7 271 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 FGFBP3Q8TAT2 258 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 SAMD8Q96LT4 415 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 SNX18Q96RF0 628 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 DGCR6LQ9BY27 220 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 LRMDAQ9H2I8 198 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 BARX1Q9HBU1 254 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-211ENST00000557623 IL20Q9NYY1 176 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 VSX1Q9NZR4 365 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-211ENST00000557623 CDH10Q9Y6N8 788 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 PMF1-BGLAPU3KQ54 211 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 CCDC168Q8NDH2 2452 aa10.82□□□□□ -0.68
SLIRP-211ENST00000557623 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 ARRDC5A6NEK1 342 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 B9A039 149 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 SLC16A7O60669 478 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 RENP00797 406 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 MMP7P09237 267 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-211ENST00000557623 VSIG8P0DPA2 414 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 CD99P14209 185 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 NR4A1P22736 598 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 LAP3P28838 519 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 APLNRP35414 380 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 SERPINF1P36955 418 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 CDKN1AP38936 164 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 RPS23P62266 143 aaKnown RBP10.81□□□□□ -0.68
SLIRP-211ENST00000557623 CBX1P83916 185 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 HGFACQ04756 655 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 COX10Q12887 443 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 PPP1R8Q12972 351 aaKnown RBP10.81□□□□□ -0.68
SLIRP-211ENST00000557623 SNTB2Q13425 540 aaKnown RBP10.81□□□□□ -0.68
SLIRP-211ENST00000557623 TBC1D28Q2M2D7 210 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 KRT80Q6KB66 452 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 VHLLQ6RSH7 139 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 SYT9Q86SS6 491 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 KRTAP1-3Q8IUG1 177 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 ZNF584Q8IVC4 421 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 PAPD5Q8NDF8 572 aaKnown RBP10.81□□□□□ -0.68
SLIRP-211ENST00000557623 SLC30A7Q8NEW0 376 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 OR10G2Q8NGC3 310 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 GIPC3Q8TF64 312 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 HTRA1Q92743 480 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 CACNG6Q9BXT2 260 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 SYT4Q9H2B2 425 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 POLE4Q9NR33 117 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 VNN3Q9NY84 501 aa10.81□□□□□ -0.68
SLIRP-211ENST00000557623 ARFGEF3Q5TH69 2177 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 C12orf71A8MTZ7 269 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 H7C417 338 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 FKBP6O75344 327 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 E2F6O75461 281 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 OR4A8P0C604 315 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 CTLA4P16410 223 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 ZNF32P17041 273 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 THBS4P35443 961 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 GLRXP35754 106 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 CDKN2AP42771 156 aaKnown RBP10.8□□□□□ -0.68
SLIRP-211ENST00000557623 ARHGDIAP52565 204 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 SNRPD2P62316 118 aaKnown RBP10.8□□□□□ -0.68
SLIRP-211ENST00000557623 RAB35Q15286 201 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 EFNB3Q15768 340 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 ADIPOQQ15848 244 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 PABPC1L2AQ5JQF8 200 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 C1orf146Q5VVC0 180 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 LEG1Q6P5S2 330 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 CCDC121Q6ZUS5 278 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 PTCHD4Q6ZW05 846 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 GLB1L2Q8IW92 636 aa10.8□□□□□ -0.68
SLIRP-211ENST00000557623 ALDH16A1Q8IZ83 802 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms