RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ALKBH1Q13686 389 aaKnown RBP11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF846Q147U1 533 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 KCNMB1Q16558 191 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 MEP1BQ16820 701 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF829Q3KNS6 432 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-233ENST00000557529 FDX2Q6P4F2 183 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 DEGS2Q6QHC5 323 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 TRILQ7L0X0 811 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 FCRLAQ7L513 359 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 CEACAM19Q7Z692 300 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 KRT77Q7Z794 578 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ZIC4Q8N9L1 334 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 OR52N5Q8NH56 324 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 C11orf40Q8WZ69 217 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ABTB1Q969K4 478 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ABHD6Q9BV23 337 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 C6orf62Q9GZU0 229 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-233ENST00000557529 SLC6A15Q9H2J7 730 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ELOVL3Q9HB03 270 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF281Q9Y2X9 895 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ALPK2Q86TB3 2170 aa11.09□□□□□ -0.63
SHMT2-233ENST00000557529 ARPC4-TTLL3A0A0A6YYG9 625 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 IQCMA0A1B0GVH7 501 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 PSMD9O00233 223 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 CASKO14936 926 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 EFSO43281 561 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 CYTIPO60759 359 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 ARL6IP5O75915 188 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF432O94892 652 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 RPP14O95059 124 aaKnown RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 MPZL1O95297 269 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 SYNGR4O95473 234 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 PSKH1P11801 424 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 MYL9P24844 172 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 GUCA1AP43080 201 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 RIDAP52758 137 aaKnown RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 MXD1Q05195 221 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 RASGEF1BQ0VAM2 473 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 ACSM3Q53FZ2 586 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 YIF1BQ5BJH7 314 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 C10orf128Q5T292 105 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 LRFN4Q6PJG9 635 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 LRRC69Q6ZNQ3 347 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 TPRA1Q86W33 373 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 TMEM123Q8N131 208 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 SNIP1Q8TAD8 396 aaKnown RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 ROBO4Q8WZ75 1007 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 AP3S1Q92572 193 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF385AQ96PM9 386 aaKnown RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 DCLRE1CQ96SD1 692 aaKnown RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 AMELYQ99218 206 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 SMAD5Q99717 465 aaKnown RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 TPK1Q9H3S4 243 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 CCDC86Q9H6F5 360 aaKnown RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 ZDHHC11Q9H8X9 412 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 SEC61A2Q9H9S3 476 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 AKIP1Q9NQ31 210 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 ING1Q9UK53 422 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 MCTS1Q9ULC4 181 aaKnown RBP11.08□□□□□ -0.64
SHMT2-233ENST00000557529 FLVCR1Q9Y5Y0 555 aa11.08□□□□□ -0.64
SHMT2-233ENST00000557529 NCKAP5O14513 1909 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 MED12Q93074 2177 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 TMEM212A6NML5 194 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 GPR171O14626 319 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 SLC43A1O75387 559 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 CFL1P23528 166 aaKnown RBP11.07□□□□□ -0.64
SHMT2-233ENST00000557529 CCR9P51686 369 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 NANOS3P60323 173 aaKnown RBP11.07□□□□□ -0.64
SHMT2-233ENST00000557529 HNRNPA0Q13151 305 aaKnown RBP11.07□□□□□ -0.64
SHMT2-233ENST00000557529 ZMAT1Q5H9K5 638 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 LRRN1Q6UXK5 716 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 AAED1Q7RTV5 226 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 DCXRQ7Z4W1 244 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 CROCCP3Q8IVE0 287 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 C20orf196Q8IYI0 205 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 OR2AJ1Q8NGZ0 328 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 OR2G2Q8NGZ5 317 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 OR5AK2Q8NH90 309 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 ST7LQ8TDW4 575 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 RNF128Q8TEB7 428 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 THRSPQ92748 146 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 PDCD1LG2Q9BQ51 273 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 COMMD4Q9H0A8 199 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 LDAHQ9H6V9 325 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 EXO5Q9H790 373 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 PALMDQ9NP74 551 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 B3GAT2Q9NPZ5 323 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 EMC3Q9P0I2 261 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 CYB5R1Q9UHQ9 305 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 FOXD3Q9UJU5 478 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-233ENST00000557529 POLR1DQ9Y2S0 133 aa11.07□□□□□ -0.64
SHMT2-233ENST00000557529 IGKV3D-15A0A087WSY6 115 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 TRGV5A0A0B4J1U4 118 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 TRAV1-2A0A0B4J238 106 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 ZNF879B4DU55 563 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 DHHO43323 396 aa11.06□□□□□ -0.64
SHMT2-233ENST00000557529 ZFPL1O95159 310 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms