RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RENP00797 406 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 MMP7P09237 267 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-209ENST00000557342 CD99P14209 185 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 NR4A1P22736 598 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 LAP3P28838 519 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 APLNRP35414 380 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 SERPINF1P36955 418 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 CDKN1AP38936 164 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 RPS23P62266 143 aaKnown RBP10.81□□□□□ -0.68
SLIRP-209ENST00000557342 HGFACQ04756 655 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 COX10Q12887 443 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 PPP1R8Q12972 351 aaKnown RBP10.81□□□□□ -0.68
SLIRP-209ENST00000557342 SNTB2Q13425 540 aaKnown RBP10.81□□□□□ -0.68
SLIRP-209ENST00000557342 TBC1D28Q2M2D7 210 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 KRT80Q6KB66 452 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 VHLLQ6RSH7 139 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 SYT9Q86SS6 491 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 KRTAP1-3Q8IUG1 177 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 ZNF584Q8IVC4 421 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 PAPD5Q8NDF8 572 aaKnown RBP10.81□□□□□ -0.68
SLIRP-209ENST00000557342 SLC30A7Q8NEW0 376 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 OR10G2Q8NGC3 310 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 GIPC3Q8TF64 312 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 HTRA1Q92743 480 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 CACNG6Q9BXT2 260 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 SYT4Q9H2B2 425 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 POLE4Q9NR33 117 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 VNN3Q9NY84 501 aa10.81□□□□□ -0.68
SLIRP-209ENST00000557342 ARFGEF3Q5TH69 2177 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 C12orf71A8MTZ7 269 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 H7C417 338 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 FKBP6O75344 327 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 E2F6O75461 281 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 OR4A8P0C604 315 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 CTLA4P16410 223 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 ZNF32P17041 273 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 THBS4P35443 961 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 GLRXP35754 106 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 CDKN2AP42771 156 aaKnown RBP10.8□□□□□ -0.68
SLIRP-209ENST00000557342 ARHGDIAP52565 204 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 SNRPD2P62316 118 aaKnown RBP10.8□□□□□ -0.68
SLIRP-209ENST00000557342 RAB35Q15286 201 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 EFNB3Q15768 340 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 ADIPOQQ15848 244 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 PABPC1L2AQ5JQF8 200 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 C1orf146Q5VVC0 180 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 LEG1Q6P5S2 330 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 PTCHD4Q6ZW05 846 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 ASRGL1Q7L266 308 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 GLB1L2Q8IW92 636 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 ALDH16A1Q8IZ83 802 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 WFDC11Q8NEX6 87 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 FBXO17Q96EF6 278 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 TMUB1Q9BVT8 246 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 RERGLQ9H628 205 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 EGLN3Q9H6Z9 239 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 CDH20Q9HBT6 801 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 TBC1D23Q9NUY8 699 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 DNAJB9Q9UBS3 223 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 BAIAP2Q9UQB8 552 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 CMAHPQ9Y471 501 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 TIMM10BQ9Y5J6 103 aa10.8□□□□□ -0.68
SLIRP-209ENST00000557342 CIB2O75838 187 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 SNAP29O95721 258 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 HIST1H1CP16403 213 aaKnown RBP10.79□□□□□ -0.68
SLIRP-209ENST00000557342 LSM6P62312 80 aaKnown RBP10.79□□□□□ -0.68
SLIRP-209ENST00000557342 SCRN3Q0VDG4 424 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 SWI5Q1ZZU3 235 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 MST1LQ2TV78 715 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 CLEC12AQ5QGZ9 265 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 UNQ6126/PRO20091Q6UXV3 157 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 CD300LDQ6UXZ3 194 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 OR4K13Q8NH42 304 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 Q96MF0 132 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 BDH2Q9BUT1 245 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 ZNF416Q9BWM5 594 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 OR2H1Q9GZK4 316 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 NUAK2Q9H093 628 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 PLK3Q9H4B4 646 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 ZNF556Q9HAH1 456 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 PDP1Q9P0J1 537 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-209ENST00000557342 COA3Q9Y2R0 106 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-209ENST00000557342 OTOGQ6ZRI0 2925 aa10.79□□□□□ -0.68
SLIRP-209ENST00000557342 USF3Q68DE3 2245 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 BHLHE40O14503 412 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 DEAF1O75398 565 aaPredicted RBP10.78□□□□□ -0.68
SLIRP-209ENST00000557342 FOSL1P15407 271 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 STOMP27105 288 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 APEX1P27695 318 aaKnown RBP10.78□□□□□ -0.68
SLIRP-209ENST00000557342 PCSK6P29122 969 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 RAD52P43351 418 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 CENPAP49450 140 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 EVX1P49640 407 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 GDI2P50395 445 aaKnown RBP10.78□□□□□ -0.68
SLIRP-209ENST00000557342 PSG4Q00888 419 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.78□□□□□ -0.68
SLIRP-209ENST00000557342 AQP6Q13520 282 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 ENDOGQ14249 297 aaKnown RBP10.78□□□□□ -0.68
SLIRP-209ENST00000557342 SDR9C7Q8NEX9 313 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 OR2T33Q8NG76 320 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms