RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 PATE4P0C8F1 98 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 FOSL1P15407 271 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 MSR1P21757 451 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 TSPAN31Q12999 210 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 GK3PQ14409 553 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 CLEC12BQ2HXU8 276 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 IQCCQ4KMZ1 466 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 MESTQ5EB52 335 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 SLC25A47Q6Q0C1 308 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 UNQ6126/PRO20091Q6UXV3 157 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 ZER1Q7Z7L7 766 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 MYPOPQ86VE0 399 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-207ENST00000556831 RASD2Q96D21 266 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 ERMAPQ96PL5 475 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-207ENST00000556831 FUZQ9BT04 418 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 DYNLRB1Q9NP97 96 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 NRIP3Q9NQ35 241 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 ZNF224Q9NZL3 707 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 POLR1DQ9Y2S0 133 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 CMAHPQ9Y471 501 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 IER3IP1Q9Y5U9 82 aa12.21□□□□□ -0.45
SLIRP-207ENST00000556831 C12orf71A8MTZ7 269 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 FAM171A2A8MVW0 826 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 H7C417 338 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 PTP4A3O75365 173 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 E2F6O75461 281 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 KHDRBS3O75525 346 aaKnown RBP12.2□□□□□ -0.46
SLIRP-207ENST00000556831 CD8AP01732 235 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 APEHP13798 732 aaKnown RBP12.2□□□□□ -0.46
SLIRP-207ENST00000556831 CRABP1P29762 137 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 CENPAP49450 140 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 SELENOVP59797 346 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 FHL1Q13642 323 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 RFX4Q33E94 735 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 C1orf94Q6P1W5 598 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 PGBD2Q6P3X8 592 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 CLEC2AQ6UVW9 174 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 CXXC5Q7LFL8 322 aaKnown RBP12.2□□□□□ -0.46
SLIRP-207ENST00000556831 FAM122BQ7Z309 247 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 CLDN22Q8N7P3 220 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 C18orf12Q96KH6 178 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 MDFIQ99750 246 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 VRK1Q99986 396 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-207ENST00000556831 SYT4Q9H2B2 425 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 PLK3Q9H4B4 646 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 BATF3Q9NR55 127 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 TBC1D23Q9NUY8 699 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 U3KQV3 271 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 JMJD1CQ15652 2540 aa12.2□□□□□ -0.46
SLIRP-207ENST00000556831 IMPA2O14732 288 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 ACOT8O14734 319 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 SSX4O60224 188 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 SLC16A7O60669 478 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 CST2P09228 141 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 GSTM3P21266 225 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 CCNOP22674 350 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 NR4A1P22736 598 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 LAP3P28838 519 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 THBS4P35443 961 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 GSSP48637 474 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 ARHGDIAP52565 204 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 ADIPOQQ15848 244 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 PABPC1L2AQ5JQF8 200 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 FAM27BQ5VT28 67 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 C11orf71Q6IPW1 123 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 LEG1Q6P5S2 330 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 ZNF620Q6ZNG0 422 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 AQP11Q8NBQ7 271 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 ICA1LQ8NDH6 482 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 OR9Q2Q8NGE9 314 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 NMD3Q96D46 503 aaKnown RBP12.19□□□□□ -0.46
SLIRP-207ENST00000556831 SAMD8Q96LT4 415 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 SMR3AQ99954 134 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 WACQ9BTA9 647 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 CHID1Q9BWS9 393 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 GSX1Q9H4S2 264 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-207ENST00000556831 DLL4Q9NR61 685 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 EIF3KQ9UBQ5 218 aaKnown RBP12.19□□□□□ -0.46
SLIRP-207ENST00000556831 UGT2A1Q9Y4X1 527 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 TIMM10BQ9Y5J6 103 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 CDH10Q9Y6N8 788 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 ZANQ9Y493 2812 aa12.19□□□□□ -0.46
SLIRP-207ENST00000556831 IGKV1D-43A0A0B4J1Z2 117 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 H7C1Q1 480 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 SMAD7O15105 426 aaKnown RBP12.18□□□□□ -0.46
SLIRP-207ENST00000556831 IDH3BO43837 385 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 NDUFS7O75251 213 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 TXNDC12O95881 172 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 IGHV4-39P01824 125 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 LCKP06239 509 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 ZNF26P17031 533 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-207ENST00000556831 ZNF32P17041 273 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 STOMP27105 288 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 RAD52P43351 418 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 GDI2P50395 445 aaKnown RBP12.18□□□□□ -0.46
SLIRP-207ENST00000556831 HMGA2P52926 109 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 DSCR9P59020 149 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 HGFACQ04756 655 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms