RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 SRMP19623 302 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 EIF1AXP47813 144 aaKnown RBP16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 SLC17A1Q14916 467 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 YIF1BQ5BJH7 314 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 CEP78Q5JTW2 689 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 STPG1Q5TH74 334 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 DNM1P34Q6PK57 102 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 UNQ9370/PRO34162Q6UXP9 181 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 PIP4P1Q86T03 277 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 IL22RA1Q8N6P7 574 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 SAMD12Q8N8I0 201 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 NTNG2Q96CW9 530 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 SLC22A13Q9Y226 551 aa16.34■□□□□ 0.21
SDR39U1-220ENST00000556548 TNFSF11O14788 317 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 KHDRBS3O75525 346 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 TRAPPC6AO75865 159 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 CFL1P23528 166 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 ITGA3P26006 1051 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 EVX1P49640 407 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 SLC35A1P78382 337 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 XKRXQ6PP77 449 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 DCXRQ7Z4W1 244 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 ZNF679Q8IYX0 411 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 ZNF433Q8N7K0 673 aaPredicted RBP16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 SPERTQ8NA61 448 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 OR14L1PQ8NHC6 308 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 SUN5Q8TC36 379 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 TMEM41AQ96HV5 264 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 RBP7Q96R05 134 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 UCN2Q96RP3 112 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 FANCFQ9NPI8 374 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 TBC1D24Q9ULP9 559 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 TRAV1-2A0A0B4J238 106 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 A0A1W2PPL8 197 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 A0A1W2PQ09 198 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 PINLYPA6NC86 204 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 NPIPB13A6NJU9 1138 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 AQP7P3A6NL99 342 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 OR4C45A6NMZ5 311 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 NPIPB4C9JG80 1138 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 EIF1AYO14602 144 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 PNPP00491 289 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 ATF1P18846 271 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 PTGS2P35354 604 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 KIR3DL2P43630 455 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 MFAP5Q13361 173 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 TGIF1Q15583 401 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 WDR38Q5JTN6 314 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 RFPL4BQ6ZWI9 263 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 TRMT10AQ8TBZ6 339 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 ASB17Q8WXJ9 295 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 OXGR1Q96P68 337 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 DERL3Q96Q80 235 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 MRPL13Q9BYD1 178 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 SEC61A2Q9H9S3 476 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 LRFN1Q9P244 771 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 N6AMT1Q9Y5N5 214 aa16.33■□□□□ 0.2
SDR39U1-220ENST00000556548 LOC105371267A0A1B0GV96 52 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 EIF4EP06730 217 aaKnown RBP16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 SNRPBP14678 240 aaKnown RBP16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 CDAP32320 146 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 RFC3P40938 356 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 MFGE8Q08431 387 aaPredicted RBP16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 ATP1A1-AS1Q5TC04 95 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 FAM205BPQ63HN1 556 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 GDPD3Q7L5L3 318 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 OR5H6Q8NGV6 325 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 ACOT12Q8WYK0 555 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 SLC25A44Q96H78 314 aaPredicted RBP16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 PLA2G3Q9NZ20 509 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 EXTL2Q9UBQ6 330 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 FBXL3Q9UKT7 428 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 LRP12Q9Y561 859 aa16.32■□□□□ 0.2
SDR39U1-220ENST00000556548 A0A0J9YW62 118 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 FAM172BPA6NC97 362 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 SEC14L5O43304 696 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 IGHG1P01857 330 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 CSF3P09919 207 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 FTH1P19P0C7X4 201 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 PGA4P0DJD7 388 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 PGA3P0DJD8 388 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 CD96P40200 585 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 NR4A2P43354 598 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 CLDN17P56750 224 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 CLDN20P56880 219 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 DCAF10Q5QP82 559 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 LINC00696Q6ZRV3 163 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 RAB43Q86YS6 212 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 UBQLNLQ8IYU4 475 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 ADPRHL1Q8NDY3 354 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 OR52N5Q8NH56 324 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 C11orf40Q8WZ69 217 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 DOCK10Q96BY6 2186 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 DCBLD2Q96PD2 775 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 PIGQQ9BRB3 760 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 CENPMQ9NSP4 180 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 LRRC3CA6NJW4 275 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 EPXP11678 715 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 DEFA1P59665 94 aa16.31■□□□□ 0.2
SDR39U1-220ENST00000556548 DEFA3P59666 94 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms