RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 NIPBLQ6KC79 2804 aaeCLIP9.96□□□□□ -0.81
SLIRP-205ENST00000556310 CR1P17927 2039 aa9.96□□□□□ -0.81
SLIRP-205ENST00000556310 CHD3Q12873 2000 aaKnown RBP9.96□□□□□ -0.81
SLIRP-205ENST00000556310 TEX13CA0A0J9YWL9 993 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 SLC22A23A1A5C7 686 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 PRSS37A4D1T9 235 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 VSTM5A8MXK1 200 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 STAMBPO95630 424 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 PTHP01270 115 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 APEHP13798 732 aaKnown RBP9.96□□□□□ -0.82
SLIRP-205ENST00000556310 THBS4P35443 961 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 GSSP48637 474 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 PPOXP50336 477 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 HMGA2P52926 109 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 NUDT6P53370 316 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 RPS23P62266 143 aaKnown RBP9.96□□□□□ -0.82
SLIRP-205ENST00000556310 GALK2Q01415 458 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 RAB35Q15286 201 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 FAM98BQ52LJ0 330 aaKnown RBP9.96□□□□□ -0.82
SLIRP-205ENST00000556310 FAM27BQ5VT28 67 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 C1orf94Q6P1W5 598 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 PGBD2Q6P3X8 592 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 DPY19L2P2Q6ZN68 376 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 CIARTQ8N365 385 aaPredicted RBP9.96□□□□□ -0.82
SLIRP-205ENST00000556310 LRRC18Q8N456 261 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 SLC30A7Q8NEW0 376 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 RASD2Q96D21 266 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 LRGUKQ96M69 825 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 THTPAQ9BU02 230 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 KCNN2Q9H2S1 579 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 OR52D1Q9H346 318 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 PLK3Q9H4B4 646 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 CCNB1IP1Q9NPC3 277 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 SLC7A8Q9UHI5 535 aa9.96□□□□□ -0.82
SLIRP-205ENST00000556310 ZFHX3Q15911 3703 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 IQCMA0A1B0GVH7 501 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 A0A1W2PPL8 197 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 FAM171A2A8MVW0 826 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 TNFRSF11BO00300 401 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 ACOT8O14734 319 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 GYG2O15488 501 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 SSX4O60224 188 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 GPRIN2O60269 458 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 ICMTO60725 284 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 SNAP29O95721 258 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 TXNDC12O95881 172 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 CST2P09228 141 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 ZNF32P17041 273 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 MSR1P21757 451 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 SLC6A6P31641 620 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 GLRXP35754 106 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 GUCA1AP43080 201 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-205ENST00000556310 RPS6KA3P51812 740 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 EFNA4P52798 201 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 HSF2Q03933 536 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 PLP2Q04941 152 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 TRAP1Q12931 704 aaKnown RBP9.95□□□□□ -0.82
SLIRP-205ENST00000556310 TSPAN31Q12999 210 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 TNK1Q13470 666 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 SGCAQ16586 387 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 TBC1D28Q2M2D7 210 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 ZNF620Q6ZNG0 422 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 LINC00471Q8N535 108 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 OR4C15Q8NGM1 316 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 OR1J2Q8NGS2 313 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 GNPDA2Q8TDQ7 276 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 SLC7A6OSQ96CW6 309 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-205ENST00000556310 CDH20Q9HBT6 801 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 VSX1Q9NZR4 365 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-205ENST00000556310 IL20RAQ9UHF4 553 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 CMAHPQ9Y471 501 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 IER3IP1Q9Y5U9 82 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 FKBP7Q9Y680 259 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 RTTNQ86VV8 2226 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 CSPG4Q6UVK1 2322 aa9.95□□□□□ -0.82
SLIRP-205ENST00000556310 AQP12BA6NM10 295 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 SOCS2O14508 198 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 IMPA2O14732 288 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 ARPC3O15145 178 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 PPP1R3DO95685 299 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 CSF3P09919 207 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 RAP2AP10114 183 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 CTLA4P16410 223 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 HOXB6P17509 224 aaKnown RBP9.94□□□□□ -0.82
SLIRP-205ENST00000556310 LAP3P28838 519 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 APLNRP35414 380 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 EVX1P49640 407 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 DSCR9P59020 149 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 PCBD1P61457 104 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 ENDOGQ14249 297 aaKnown RBP9.94□□□□□ -0.82
SLIRP-205ENST00000556310 RFX4Q33E94 735 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 PABPC1L2AQ5JQF8 200 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 OR2T5Q6IEZ7 315 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 RPL13AP3Q6NVV1 102 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 PGM2L1Q6PCE3 622 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 CLEC2AQ6UVW9 174 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 PTCHD4Q6ZW05 846 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 AQP12AQ8IXF9 295 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 ADGRG5Q8IZF4 528 aa9.94□□□□□ -0.82
SLIRP-205ENST00000556310 SVOPLQ8N434 492 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms