RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 NKX2-6A6NCS4 301 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 CCDC182A6NF36 153 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 C12orf71A8MTZ7 269 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 PYCARD-AS1I3L0S3 204 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 TMCC2O75069 709 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 TFP02787 698 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 CST2P09228 141 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 GAAP10253 952 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 ZNF823P16415 610 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 UGT2B10P36537 528 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 PEX19P40855 299 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 PCBD1P61457 104 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 SORDQ00796 357 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 POU4F2Q12837 409 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 MED21Q13503 144 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 TBRG1Q3YBR2 411 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 TEX30Q5JUR7 227 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 TIMM23BQ5SRD1 257 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 KRT80Q6KB66 452 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 SYT9Q86SS6 491 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 OR10H5Q8NGA6 315 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 APH1BQ8WW43 257 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 C11orf40Q8WZ69 217 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 HSD17B8Q92506 261 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 NABP1Q96AH0 204 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 CDADC1Q9BWV3 514 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 MOV10Q9HCE1 1003 aaKnown RBP10.93□□□□□ -0.66
SHMT2-221ENST00000555773 PLCXD1Q9NUJ7 323 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 MRPS18AQ9NVS2 196 aaKnown RBP10.93□□□□□ -0.66
SHMT2-221ENST00000555773 DNAJC27Q9NZQ0 273 aa10.93□□□□□ -0.66
SHMT2-221ENST00000555773 FREM1Q5H8C1 2179 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 ARPC4-TTLL3A0A0A6YYG9 625 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 CLEC18AA5D8T8 446 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 OR5H1A6NKK0 313 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 RAD51DO75771 328 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 MPZL1O95297 269 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 SCG5P05408 212 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 B4GALT1P15291 398 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 HOXC12P31275 282 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 ATP6V1E1P36543 226 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 MTNR1AP48039 350 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 UBE2NP61088 152 aaKnown RBP10.92□□□□□ -0.66
SHMT2-221ENST00000555773 TFF3Q07654 80 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 GGTLC2Q14390 218 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 CDSNQ15517 529 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 PCK2Q16822 640 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 SLC36A2Q495M3 483 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 KLHL22Q53GT1 634 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 C6orf141Q5SZD1 244 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 CLEC18BQ6UXF7 455 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 SHFQ7M4L6 423 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 SLC16A14Q7RTX9 510 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 SKA3Q8IX90 412 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 TIGD4Q8IY51 512 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 ZNF511Q8NB15 262 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 CLEC18CQ8NCF0 446 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 CNIH3Q8TBE1 160 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 SSC4DQ8WTU2 575 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 NANOS1Q8WY41 292 aaKnown RBP10.92□□□□□ -0.66
SHMT2-221ENST00000555773 MUCL1Q96DR8 90 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 ZMYND19Q96E35 227 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-221ENST00000555773 CNBD2Q96M20 576 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 INTS14Q96SY0 518 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 MNTQ99583 582 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 SLC17A5Q9NRA2 495 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 MRPL22Q9NWU5 206 aaKnown RBP10.92□□□□□ -0.66
SHMT2-221ENST00000555773 AASSQ9UDR5 926 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 AMDHD2Q9Y303 409 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 PCDHGB1Q9Y5G3 927 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 TIMM10BQ9Y5J6 103 aa10.92□□□□□ -0.66
SHMT2-221ENST00000555773 SPTBN1Q01082 2364 aaKnown RBP10.91□□□□□ -0.66
SHMT2-221ENST00000555773 A0A096LPE4 126 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 A0A1W2PPZ6 126 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 IRGMA1A4Y4 181 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 TVP23AA6NH52 213 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 ZNF593O00488 134 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-221ENST00000555773 UBL3O95164 117 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 WNT11O96014 354 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 ARR3P36575 388 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 ENTPD1P49961 510 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 ADAM8P78325 824 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 SRSF1Q07955 248 aaKnown RBP eCLIP10.91□□□□□ -0.66
SHMT2-221ENST00000555773 DBPQ10586 325 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-221ENST00000555773 ENDOGQ14249 297 aaKnown RBP10.91□□□□□ -0.66
SHMT2-221ENST00000555773 KLHL24Q6TFL4 600 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 SLC16A9Q7RTY1 509 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 FAM169BQ8N8A8 192 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 ZNF454Q8N9F8 522 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 WDR31Q8NA23 367 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 S100PBPQ96BU1 408 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 FOXN4Q96NZ1 517 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 SH3GL3Q99963 347 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 ZNF416Q9BWM5 594 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 YTHDF1Q9BYJ9 559 aaKnown RBP10.91□□□□□ -0.66
SHMT2-221ENST00000555773 YIPF3Q9GZM5 350 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 ACTR6Q9GZN1 396 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 SCN3BQ9NY72 215 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 NDRG3Q9UGV2 375 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 CYB5R1Q9UHQ9 305 aa10.91□□□□□ -0.66
SHMT2-221ENST00000555773 KLF2Q9Y5W3 355 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms