RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PTPN13Q12923 2485 aa9.6□□□□□ -0.87
SHMT2-218ENST00000555213 DOPEY2Q9Y3R5 2298 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 ANKHD1Q8IWZ3 2542 aaKnown RBP9.59□□□□□ -0.87
SHMT2-218ENST00000555213 TEX13CA0A0J9YWL9 993 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 RPL36A-HNRNPH2H7BZ11 118 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 DCTN6O00399 190 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 CASKO14936 926 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 RGS10O43665 173 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 UPK3AO75631 287 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 PGA4P0DJD7 388 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 PGA3P0DJD8 388 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 HTR1FP30939 366 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 SDHAP31040 664 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 CCKARP32238 428 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 ACVR1BP36896 505 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 NR1H2P55055 460 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 KRR1Q13601 381 aaKnown RBP9.59□□□□□ -0.87
SHMT2-218ENST00000555213 STK11Q15831 433 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 C1QTNF12Q5T7M4 302 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 LINC01590Q5TEZ4 76 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 C9orf135Q5VTT2 229 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 RNLSQ5VYX0 342 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 AHSA2Q719I0 299 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 P2RY8Q86VZ1 359 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 JAZF1Q86VZ6 243 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF433Q8N7K0 673 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-218ENST00000555213 ARIH2OSQ8N7S6 290 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 OR52I1Q8NGK6 324 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 S100PBPQ96BU1 408 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 DACH2Q96NX9 599 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 COPS4Q9BT78 406 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 CDCA4Q9BXL8 241 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 TEX12Q9BXU0 123 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 CRLF2Q9HC73 371 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 GPR35Q9HC97 309 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 GLTPQ9NZD2 209 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 KCNN3Q9UGI6 736 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 CLEC2DQ9UHP7 191 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 KLHL21Q9UJP4 597 aa9.59□□□□□ -0.87
SHMT2-218ENST00000555213 RPL36Q9Y3U8 105 aaKnown RBP9.59□□□□□ -0.87
SHMT2-218ENST00000555213 EFCAB10A6NFE3 127 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF99A8MXY4 864 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-218ENST00000555213 PRR23D1E9PI22 279 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-218ENST00000555213 AHCYL1O43865 530 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 TRMUO75648 421 aaKnown RBP9.58□□□□□ -0.88
SHMT2-218ENST00000555213 ITGA5P08648 1049 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 PRR23D2P0DMB1 279 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-218ENST00000555213 EEF1B2P24534 225 aaKnown RBP9.58□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF84P51523 738 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 SLC25A1P53007 311 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 LGALS3BPQ08380 585 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 CEACAM16Q2WEN9 425 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 SP5Q6BEB4 398 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-218ENST00000555213 SATL1Q86VE3 508 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 OR6V1Q8N148 313 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 SYT14Q8NB59 555 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 ACBD4Q8NC06 268 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 SDR9C7Q8NEX9 313 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 HSD17B8Q92506 261 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 TMEM54Q969K7 222 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 MUCL1Q96DR8 90 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 RNFT2Q96EX2 444 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 TSSK2Q96PF2 358 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 RBP7Q96R05 134 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 MOV10Q9HCE1 1003 aaKnown RBP9.58□□□□□ -0.88
SHMT2-218ENST00000555213 NGBQ9NPG2 151 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 OBP2BQ9NPH6 170 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 ACOT13Q9NPJ3 140 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 BATF3Q9NR55 127 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 HAO2Q9NYQ3 351 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 BLOC1S6Q9UL45 172 aa9.58□□□□□ -0.88
SHMT2-218ENST00000555213 OR5H1A6NKK0 313 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 RIIAD1A6NNX1 92 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 H3BSA7 217 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 ARHGEF9O43307 516 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 INMTO95050 263 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 APOL3O95236 402 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 GOSR1O95249 250 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 FARS2O95363 451 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 WNT11O96014 354 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 IFNGP01579 166 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 GYPBP06028 91 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 QDPRP09417 244 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 PAX7P23759 505 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 GSTT1P30711 240 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 GUCA1AP43080 201 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 MTNR1AP48039 350 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 GP2P55259 537 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 CDH11P55287 796 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 UBE2NP61088 152 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 TMED1Q13445 227 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 SNTB1Q13884 538 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 TSC22D1Q15714 1073 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 TIMM23BQ5SRD1 257 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 THEM4Q5T1C6 240 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 UBE2UQ5VVX9 321 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 LEG1Q6P5S2 330 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 ANKRD16Q6P6B7 361 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 DNM1P34Q6PK57 102 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF485Q8NCK3 441 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms