RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 MT-ND5P03915 603 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 F13BP05160 661 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 ADH4P08319 380 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 PATE4P0C8F1 98 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 FAM157BP0CG42 384 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 LYNX1P0DP58 116 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 SAGP10523 405 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 NAT2P11245 290 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 COL8A2P25067 703 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 IFNA8P32881 189 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 AQP2P41181 271 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 ALDH3B1P43353 468 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 SELENOWP63302 87 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 TEKQ02763 1124 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 GABPB1Q06547 395 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 ST3GAL3Q11203 375 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 TRAP1Q12931 704 aaKnown RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 SCGB2A2Q13296 93 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 PIN1Q13526 163 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 MAD2L1BPQ15013 274 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 NKPD1Q17RQ9 610 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 CYBRD1Q53TN4 286 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 FAM27BQ5VT28 67 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 SLC25A47Q6Q0C1 308 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 CCDC121Q6ZUS5 278 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 FOXL2NBQ6ZUU3 175 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 IL17RELQ6ZVW7 336 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 OFCC1Q8IZS5 231 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 PAQR4Q8N4S7 273 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 TEX29Q8N6K0 151 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 FAM156AQ8NDB6 213 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 PFN4Q8NHR9 129 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 CLDND2Q8NHS1 167 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 TMEM255BQ8WV15 326 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 SNX33Q8WV41 574 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 YIPF5Q969M3 257 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 NABP1Q96AH0 204 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 CDRT15Q96T59 188 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 BTBD10Q9BSF8 475 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 WACQ9BTA9 647 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 KCNN2Q9H2S1 579 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 RNF121Q9H920 327 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 HINT3Q9NQE9 182 aaKnown RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 ZNF275Q9NSD4 429 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 TAS2R1Q9NYW7 299 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 TAAR3PQ9P1P4 343 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 CGGBP1Q9UFW8 167 aaPredicted RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 DUSP13Q9UII6 198 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 SAMD4AQ9UPU9 718 aaKnown RBP5.65□□□□□ -1.5
SLIRP-203ENST00000554074 UGT2A1Q9Y4X1 527 aa5.65□□□□□ -1.5
SLIRP-203ENST00000554074 TRAV20A0A0B4J274 112 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 A6NIZ1 184 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 AHCYL1O43865 530 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 DNAJC8O75937 253 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 CLPTM1O96005 669 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 LCKP06239 509 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 MSMBP08118 114 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 CST2P09228 141 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 GAAP10253 952 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 ANPEPP15144 967 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 ZNF32P17041 273 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 TCN1P20061 433 aaPredicted RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 TNFRSF1BP20333 461 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 TUBG1P23258 451 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 STOMP27105 288 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 APLNRP35414 380 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 SRP14P37108 136 aaKnown RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 LIPAP38571 399 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 CRYBB2P43320 205 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 MAGEB1P43366 347 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 OR1E2P47887 323 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 SLC9A3P48764 834 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 RAP1BP61224 184 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 RPL27P61353 136 aaKnown RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 PCBD1P61457 104 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 LMO4P61968 165 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 RAP1AP62834 184 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 CBX1P83916 185 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 MYBPC1Q00872 1141 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 HSF2Q03933 536 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 PRKCDQ05655 676 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 CCNIQ14094 377 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 TRIM25Q14258 630 aaKnown RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 ALG10Q5BKT4 473 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 PABPC1L2AQ5JQF8 200 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 THEM4Q5T1C6 240 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 MBNL2Q5VZF2 373 aaKnown RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 GLYATQ6IB77 296 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 TMEM154Q6P9G4 183 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 CBLL1Q75N03 491 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 SYT9Q86SS6 491 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 C10orf67Q8IYJ2 551 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 ALDH16A1Q8IZ83 802 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 RNF113BQ8IZP6 322 aaKnown RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 LRRC18Q8N456 261 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 LRRC75AQ8NAA5 344 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 SYT14Q8NB59 555 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 CPEB3Q8NE35 698 aaKnown RBP5.64□□□□□ -1.51
SLIRP-203ENST00000554074 OR51F2Q8NH61 342 aa5.64□□□□□ -1.51
SLIRP-203ENST00000554074 MOSPD2Q8NHP6 518 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms