RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 CCNYL1Q8N7R7 359 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 DEFB108BQ8NET1 73 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 NUP37Q8NFH4 326 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 OR9K2Q8NGE7 335 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CEP70Q8NHQ1 597 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 FAM76AQ8TAV0 307 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TWIST2Q8WVJ9 160 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 WDR60Q8WVS4 1066 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CKAP2Q8WWK9 683 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 IPCEF1Q8WWN9 437 aaPredicted RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 OR5P2Q8WZ92 322 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ST8SIA1Q92185 356 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 MRPL24Q96A35 216 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 PPCDCQ96CD2 204 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 FAHD2AQ96GK7 314 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 REXO5Q96IC2 774 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CCT7Q99832 543 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 EMC6Q9BV81 110 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 KATNB1Q9BVA0 655 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 NMUR2Q9GZQ4 415 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 SLC25A32Q9H2D1 315 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF442Q9H7R0 627 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF665Q9H7R5 613 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 C3orf14Q9HBI5 128 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 C1orf109Q9NX04 203 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TMEM181Q9P2C4 612 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 UPB1Q9UBR1 384 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 CHRNA9Q9UGM1 479 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TBK1Q9UHD2 729 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 MRTO4Q9UKD2 239 aaKnown RBP2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TMCO1Q9UM00 188 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 RCE1Q9Y256 329 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 AMDHD2Q9Y303 409 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 TMED7Q9Y3B3 224 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 SNX8Q9Y5X2 465 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 DNAH1Q9P2D7 4330 aa2.64□□□□□ -1.99
SLIRP-202ENST00000553981 IGKV1D-43A0A0B4J1Z2 117 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 RPL36A-HNRNPH2H7BZ11 118 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 TRIM77I1YAP6 450 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 AZIN1O14977 448 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 TRAF3IP2O43734 574 aaPredicted RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 GLRA3O75311 464 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 LYPLA1O75608 230 aaPredicted RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 MPZL1O95297 269 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 PNPP00491 289 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 CSTAP01040 98 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 THY1P04216 161 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 ALDOCP09972 364 aaKnown RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 IGHV4-38-2P0DP08 117 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 SAGP10523 405 aaPredicted RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 UROSP10746 265 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 PNMTP11086 282 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 HPGDP15428 266 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 NPR2P20594 1047 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 ANOS1P23352 680 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 HTR2AP28223 471 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 ALDH3A1P30838 453 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 LCN1P31025 176 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 APOBEC1P41238 236 aaKnown RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 PAFAH1B1P43034 410 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 GPR6P46095 362 aaPredicted RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 SERPINB9P50453 376 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 CLDN17P56750 224 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 SNRPD2P62316 118 aaKnown RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 ROR2Q01974 943 aaKnown RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 PAX2Q02962 417 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 NPRL3Q12980 569 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 SNTB2Q13425 540 aaKnown RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 SLC9A3R2Q15599 337 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 PDCD2Q16342 344 aaPredicted RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 IMPG1Q17R60 797 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 CEACAM16Q2WEN9 425 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 GLIPR1L2Q4G1C9 344 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 C6orf136Q5SQH8 315 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 MRPL2Q5T653 305 aaKnown RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 IL23RQ5VWK5 629 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 SAXO2Q658L1 398 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 FAM90A2PQ658T7 463 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 OR7E24Q6IFN5 339 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 LEG1Q6P5S2 330 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 PAQR6Q6TCH4 344 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 KLHL17Q6TDP4 642 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 KLHL24Q6TFL4 600 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 SYT10Q6XYQ8 523 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 ZNF836Q6ZNA1 936 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 RNF165Q6ZSG1 346 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 C17orf78Q8N4C9 275 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 MMGT1Q8N4V1 131 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 FAM156AQ8NDB6 213 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 PIGXQ8TBF5 258 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 AGR3Q8TD06 166 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 MIPOL1Q8TD10 442 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 MAGEE2Q8TD90 523 aaPredicted RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 ROPN1LQ96C74 230 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 KTI12Q96EK9 354 aaPredicted RBP2.63□□□□□ -1.99
SLIRP-202ENST00000553981 CHMP6Q96FZ7 201 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 PPP1R36Q96LQ0 422 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 PKP2Q99959 881 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 ELOVL1Q9BW60 279 aa2.63□□□□□ -1.99
SLIRP-202ENST00000553981 LINC00470Q9BZP3 86 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms