RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SNAP29O95721 258 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 IFNGP01579 166 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 TP53P04637 393 aaPredicted RBP8.1□□□□□ -1.11
CHD8-206ENST00000553870 HMGN1P05114 100 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 OSMP13725 252 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 CTLA4P16410 223 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 NR4A1P22736 598 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 CDAP32320 146 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 CENPAP49450 140 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 ART1P52961 327 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 BLVRAP53004 296 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 GLO1Q04760 184 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 FMODQ06828 376 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 NPRL3Q12980 569 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 TESK1Q15569 626 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 PGGHGQ32M88 737 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 SLC36A3Q495N2 470 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 CLEC12AQ5QGZ9 265 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 LEG1Q6P5S2 330 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 PRSS57Q6UWY2 283 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 UNQ6126/PRO20091Q6UXV3 157 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 SPNS3Q6ZMD2 512 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 PTCHD4Q6ZW05 846 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 TMEM179BQ7Z7N9 219 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 ZDHHC13Q8IUH4 622 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 MUC15Q8N387 334 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 PARP8Q8N3A8 854 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 SVOPLQ8N434 492 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 LRRC18Q8N456 261 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 ATG16L2Q8NAA4 619 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 NPEPL1Q8NDH3 523 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 OR52E2Q8NGJ4 325 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 OR4K13Q8NH42 304 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 FGFBP3Q8TAT2 258 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 TEX47Q8TBZ9 253 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 NEUROG1Q92886 237 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 TRMT61AQ96FX7 289 aaKnown RBP8.1□□□□□ -1.11
CHD8-206ENST00000553870 CENPNQ96H22 339 aaPredicted RBP8.1□□□□□ -1.11
CHD8-206ENST00000553870 NMNAT3Q96T66 252 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 DDOQ99489 341 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 NIPSNAP1Q9BPW8 284 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 GSX2Q9BZM3 304 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 NUAK2Q9H093 628 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 RACGAP1Q9H0H5 632 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 EGLN3Q9H6Z9 239 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 CA10Q9NS85 328 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 CBLN4Q9NTU7 201 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 TBC1D23Q9NUY8 699 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 ZNF701Q9NV72 531 aaPredicted RBP8.1□□□□□ -1.11
CHD8-206ENST00000553870 REV1Q9UBZ9 1251 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 ENOPH1Q9UHY7 261 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 LAMP3Q9UQV4 416 aa8.1□□□□□ -1.11
CHD8-206ENST00000553870 COA3Q9Y2R0 106 aaPredicted RBP8.1□□□□□ -1.11
CHD8-206ENST00000553870 RAI1Q7Z5J4 1906 aaPredicted RBP8.09□□□□□ -1.11
CHD8-206ENST00000553870 PDZD2O15018 2839 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 DSCAMO60469 2012 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 A0A1W2PPL8 197 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 B9A039 149 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 ATP6V1G2-DDX39BF2Z307 99 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 G3V2T6 193 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 H3BN98 237 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 H7C1C5 153 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 SOD3P08294 240 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 CELA3BP08861 270 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 PATE4P0C8F1 98 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 COX5BP10606 129 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 ZNF32P17041 273 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 TUBG1P23258 451 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 PCSK6P29122 969 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 CALCRP30988 508 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 GRK5P34947 590 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 APLNRP35414 380 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 GLRXP35754 106 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 SERPINF1P36955 418 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 RAD52P43351 418 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 EVX1P49640 407 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 RPS23P62266 143 aaKnown RBP8.09□□□□□ -1.11
CHD8-206ENST00000553870 LCN6P62502 163 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 NKX6-1P78426 367 aaPredicted RBP8.09□□□□□ -1.11
CHD8-206ENST00000553870 PSG4Q00888 419 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 GALK2Q01415 458 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 HSF2Q03933 536 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 HGFACQ04756 655 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.09□□□□□ -1.11
CHD8-206ENST00000553870 SPOCK1Q08629 439 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 SCRN3Q0VDG4 424 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 DAG1Q14118 895 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 RAB39AQ14964 217 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 ETFDHQ16134 617 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 TBC1D28Q2M2D7 210 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 ZNF362Q5T0B9 420 aaPredicted RBP8.09□□□□□ -1.11
CHD8-206ENST00000553870 SLC35F1Q5T1Q4 408 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 SHEQ5VZ18 495 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 SLC27A4Q6P1M0 643 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 FAHD1Q6P587 224 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 OR6V1Q8N148 313 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 SLC30A7Q8NEW0 376 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 OR2T4Q8NH00 348 aa8.09□□□□□ -1.11
CHD8-206ENST00000553870 IPCEF1Q8WWN9 437 aaPredicted RBP8.09□□□□□ -1.11
CHD8-206ENST00000553870 FBXO17Q96EF6 278 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms