RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PHYHD1Q5SRE7 291 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 ARMC4Q5T2S8 1044 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 SHEQ5VZ18 495 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 UNQ6126/PRO20091Q6UXV3 157 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 DPY19L2P2Q6ZN68 376 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 ZNF627Q7L945 461 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 THAP5Q7Z6K1 395 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 ADCK1Q86TW2 530 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 MDP1Q86V88 176 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 MEX3DQ86XN8 651 aaKnown RBP7.26□□□□□ -1.25
PSEN1-209ENST00000553855 LRRC75A-AS1Q8N1F1 130 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 OR1J2Q8NGS2 313 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 DHRS9Q9BPW9 319 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 IFT27Q9BW83 186 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 CDADC1Q9BWV3 514 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 MRPL13Q9BYD1 178 aaKnown RBP7.26□□□□□ -1.25
PSEN1-209ENST00000553855 RERGLQ9H628 205 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 SEC61A2Q9H9S3 476 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 ZNF556Q9HAH1 456 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 SIAEQ9HAT2 523 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 CDH20Q9HBT6 801 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 EMC7Q9NPA0 242 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 TMEM38BQ9NVV0 291 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 FBXO9Q9UK97 447 aaPredicted RBP7.26□□□□□ -1.25
PSEN1-209ENST00000553855 PMF1-BGLAPU3KQ54 211 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 ADGRG4Q8IZF6 3080 aa7.26□□□□□ -1.25
PSEN1-209ENST00000553855 IGHV1-18A0A0C4DH31 117 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 A0A1W2PPL8 197 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 A0A1W2PPR1 153 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 TCRBV5S2A0A599 114 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 SLC22A23A1A5C7 686 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 SHISA9B4DS77 424 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 ATP6V1G2-DDX39BF2Z307 99 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 EBAG9O00559 213 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 CDC42EP2O14613 210 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 ACOT8O14734 319 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 GSC2O15499 205 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 IGKV3-15P01624 115 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 ERCC1P07992 297 aaPredicted RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 CECR9P0C854 216 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 APEHP13798 732 aaKnown RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 CRABP1P29762 137 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 SDHAP31040 664 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 TTKP33981 857 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 APLNRP35414 380 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 MAGEA2P43356 314 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 CENPAP49450 140 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 ATP5J2P56134 94 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 SELENOVP59797 346 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 RPS23P62266 143 aaKnown RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 SNRPD2P62316 118 aaKnown RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 MRPS34P82930 218 aaKnown RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 NAAAQ02083 359 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 TSPAN31Q12999 210 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 SEC23BQ15437 767 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 HIST3H3Q16695 136 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 TBC1D28Q2M2D7 210 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 RFX4Q33E94 735 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 C10orf128Q5T292 105 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 C1orf146Q5VVC0 180 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 C1orf94Q6P1W5 598 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 NHLRC1Q6VVB1 395 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 TSEN54Q7Z6J9 526 aaKnown RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 ZER1Q7Z7L7 766 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 MUC15Q8N387 334 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 HDAC2Q92769 488 aaKnown RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 SLC7A6OSQ96CW6 309 aaPredicted RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 PERPQ96FX8 193 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 ERMAPQ96PL5 475 aaPredicted RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 TSPAN32Q96QS1 320 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 WACQ9BTA9 647 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 CHID1Q9BWS9 393 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 TEX12Q9BXU0 123 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 OR52D1Q9H346 318 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 BARX1Q9HBU1 254 aaPredicted RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 CBLN4Q9NTU7 201 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 CRNNQ9UBG3 495 aaPredicted RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 EIF3KQ9UBQ5 218 aaKnown RBP7.25□□□□□ -1.25
PSEN1-209ENST00000553855 SIGLEC7Q9Y286 467 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 IER3IP1Q9Y5U9 82 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 LYVE1Q9Y5Y7 322 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 U3KQE9 123 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 CRYBG3Q68DQ2 2970 aa7.25□□□□□ -1.25
PSEN1-209ENST00000553855 TEX13CA0A0J9YWL9 993 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 PRSS37A4D1T9 235 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 C12orf71A8MTZ7 269 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 H3BS24 57 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 SOCS2O14508 198 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 IMPA2O14732 288 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 IDH3BO43837 385 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 PTP4A3O75365 173 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 KHDRBS3O75525 346 aaKnown RBP7.24□□□□□ -1.25
PSEN1-209ENST00000553855 SLC2A10O95528 541 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 PPP1R3DO95685 299 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 IGLV1-44P01699 117 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 MSR1P21757 451 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 GNALP38405 381 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 LIMS1P48059 325 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 PTH2RP49190 550 aa7.24□□□□□ -1.25
PSEN1-209ENST00000553855 HMGA2P52926 109 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms