RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 ZNF587BE7ETH6 402 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 ZNF670-ZNF695F2Z2N8 137 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 ZNF593O00488 134 aaPredicted RBP10.37□□□□□ -0.75
NEK9-202ENST00000553823 TMCC2O75069 709 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 INMTO95050 263 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 IGHV3-9P01782 118 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 LCKP06239 509 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 SPARCP09486 303 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 EDNRAP25101 427 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 CDAP32320 146 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 TIMP3P35625 211 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 OR3A2P47893 321 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 PER3P56645 1201 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 SIRPAP78324 504 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 ROR2Q01974 943 aaKnown RBP10.37□□□□□ -0.75
NEK9-202ENST00000553823 ZNF85Q03923 595 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 GALEQ14376 348 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 STK11Q15831 433 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 KCNMB1Q16558 191 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 MEP1BQ16820 701 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 EIF2S3LQ2VIR3 472 aaKnown RBP10.37□□□□□ -0.75
NEK9-202ENST00000553823 CEACAM16Q2WEN9 425 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 TEX30Q5JUR7 227 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 OTPQ5XKR4 325 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 TMPRSS11AQ6ZMR5 421 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 FOXL2NBQ6ZUU3 175 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 SEM1Q6ZVN7 128 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 LINGO2Q7L985 606 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 ZNF367Q7RTV3 350 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 DOLPP1Q86YN1 238 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 KLHL36Q8N4N3 616 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 OR52N1Q8NH53 320 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 OTOSQ8NHW6 89 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 ZNF837Q96EG3 531 aaPredicted RBP10.37□□□□□ -0.75
NEK9-202ENST00000553823 ZFP3Q96NJ6 502 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 MYCBPQ99417 103 aaPredicted RBP10.37□□□□□ -0.75
NEK9-202ENST00000553823 ALG8Q9BVK2 526 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 NELFAQ9H3P2 528 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 C12orf49Q9H741 205 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 GPR35Q9HC97 309 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 POLE4Q9NR33 117 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 SLC7A10Q9NS82 523 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 UPB1Q9UBR1 384 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 LAMP5Q9UJQ1 280 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 COPS3Q9UNS2 423 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 CAB39Q9Y376 341 aaPredicted RBP10.37□□□□□ -0.75
NEK9-202ENST00000553823 TMEM14AQ9Y6G1 99 aa10.37□□□□□ -0.75
NEK9-202ENST00000553823 DIDO1Q9BTC0 2240 aaKnown RBP10.37□□□□□ -0.75
NEK9-202ENST00000553823 RPL36A-HNRNPH2H7BZ11 118 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 PHYHO14832 338 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 IL2RAP01589 272 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 SCG5P05408 212 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 CRHP06850 196 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 ALOX5APP20292 161 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 NPR2P20594 1047 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 MSR1P21757 451 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 PSMB9P28065 219 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 RPS27P42677 84 aaKnown RBP10.36□□□□□ -0.75
NEK9-202ENST00000553823 KIR2DL2P43627 348 aaPredicted RBP10.36□□□□□ -0.75
NEK9-202ENST00000553823 WNT4P56705 351 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 LSM6P62312 80 aaKnown RBP10.36□□□□□ -0.75
NEK9-202ENST00000553823 MRPS34P82930 218 aaKnown RBP10.36□□□□□ -0.75
NEK9-202ENST00000553823 NFATC3Q12968 1075 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 SPHARQ15513 63 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 MED22Q15528 200 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 SGCAQ16586 387 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 PCK2Q16822 640 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 SYT6Q5T7P8 510 aaPredicted RBP10.36□□□□□ -0.75
NEK9-202ENST00000553823 OR2G6Q5TZ20 316 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 SLC18B1Q6NT16 456 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 C3P1Q6ZMU1 363 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 SSX6Q7RTT6 188 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 ABHD12BQ7Z5M8 362 aaPredicted RBP10.36□□□□□ -0.75
NEK9-202ENST00000553823 UBE2J2Q8N2K1 259 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 RFLNBQ8N5W9 214 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 CNEP1R1Q8N9A8 125 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 ZNF454Q8N9F8 522 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 ST6GALNAC3Q8NDV1 305 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 OR6K3Q8NGY3 331 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 OR5M11Q96RB7 305 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 CDADC1Q9BWV3 514 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 EMC7Q9NPA0 242 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 BATF3Q9NR55 127 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 TMEM38BQ9NVV0 291 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 KCNG2Q9UJ96 466 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 POLR1DQ9Y2S0 133 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 KLHDC2Q9Y2U9 406 aa10.36□□□□□ -0.75
NEK9-202ENST00000553823 LSM2Q9Y333 95 aaKnown RBP10.36□□□□□ -0.75
NEK9-202ENST00000553823 TOXO94900 526 aa10.35□□□□□ -0.75
NEK9-202ENST00000553823 MT-ND5P03915 603 aa10.35□□□□□ -0.75
NEK9-202ENST00000553823 TMIGD3P0DMS9 266 aaPredicted RBP10.35□□□□□ -0.75
NEK9-202ENST00000553823 GLI4P10075 376 aa10.35□□□□□ -0.75
NEK9-202ENST00000553823 PSKH1P11801 424 aa10.35□□□□□ -0.75
NEK9-202ENST00000553823 CD79BP40259 229 aa10.35□□□□□ -0.75
NEK9-202ENST00000553823 GP2P55259 537 aaKnown RBP10.35□□□□□ -0.75
NEK9-202ENST00000553823 ACTA2P62736 377 aa10.35□□□□□ -0.75
NEK9-202ENST00000553823 ACTG2P63267 376 aa10.35□□□□□ -0.75
NEK9-202ENST00000553823 FAPQ12884 760 aa10.35□□□□□ -0.75
NEK9-202ENST00000553823 FOXF2Q12947 444 aa10.35□□□□□ -0.75
NEK9-202ENST00000553823 EIF2B1Q14232 305 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms