RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, human

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCFC2-204	ENST00000550335	MFSD6L	Q8IWD5	586 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	CEND1	Q8N111	149 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	ZNF557	Q8N988	423 aa	Predicted RBP	4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	MRAP	Q8TCY5	172 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	SDR42E1	Q8WUS8	393 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	PIBF1	Q8WXW3	757 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	NRGN	Q92686	78 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	FOXN4	Q96NZ1	517 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	BCL7B	Q9BQE9	202 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	TMEM246	Q9BRR3	403 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	ZDHHC11	Q9H8X9	412 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	AHSP	Q9NZD4	102 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	MMP24	Q9Y5R2	645 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	C4B	P0C0L5	1744 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	TAF1L	Q8IZX4	1826 aa		4.23	□□□□□ -1.73
HCFC2-204	ENST00000550335	SCN11A	Q9UI33	1791 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335		A0A0G2JLM5	398 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	FAM168B	A1KXE4	195 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	BCL2L11	O43521	198 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	ALDOB	P05062	364 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335		P0C879	139 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	GABRR1	P24046	479 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	SLC1A1	P43005	524 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	CX3CR1	P49238	355 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	RORC	P51449	518 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	DNAJC3	Q13217	504 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	NSDHL	Q15738	373 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	LCN12	Q6JVE5	192 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	PRSS41	Q7RTY9	318 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	CMTM1	Q8IZ96	169 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	HSD17B11	Q8NBQ5	300 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	BBS1	Q8NFJ9	593 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	SGK3	Q96BR1	496 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	C16orf74	Q96GX8	76 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	MAGEB18	Q96M61	343 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	OR5B12	Q96R08	314 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	CWH43	Q9H720	699 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	SLC25A22	Q9H936	323 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	SH2D2A	Q9NP31	389 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	PXMP2	Q9NR77	195 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	SLC7A10	Q9NS82	523 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	SLC25A15	Q9Y619	301 aa		4.22	□□□□□ -1.73
HCFC2-204	ENST00000550335	USP42	Q9H9J4	1324 aa	Known RBP	4.21	□□□□□ -1.73
HCFC2-204	ENST00000550335	KCP	Q6ZWJ8	1503 aa		4.21	□□□□□ -1.73
HCFC2-204	ENST00000550335	ZFP92	A6NM28	416 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	C12orf77	C9JDV5	145 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335		F6UB75	175 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	SIRPB1	O00241	398 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	CDC7	O00311	574 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	TNFSF13	O75888	250 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	CCNB2	O95067	398 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	CCNB1	P14635	433 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	CD1E	P15812	388 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	CMA1	P23946	247 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	STOM	P27105	288 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	NAMPT	P43490	491 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	BCAP31	P51572	246 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	STX17	P56962	302 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	IRX3	P78415	501 aa	Predicted RBP	4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	IGLV3-21	P80748	117 aa	Predicted RBP	4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	CAVIN4	Q5BKX8	364 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	PLCXD3	Q63HM9	321 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	BAIAP2L2	Q6UXY1	529 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335		Q6ZSR3	168 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	SCD5	Q86SK9	330 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	P2RY8	Q86VZ1	359 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	PDIK1L	Q8N165	341 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	C14orf178	Q8N769	122 aa	Predicted RBP	4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	FBXL13	Q8NEE6	735 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	CAPSL	Q8WWF8	208 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	ISG20	Q96AZ6	181 aa	Known RBP	4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	PKNOX2	Q96KN3	472 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	DNTTIP1	Q9H147	329 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	ELOVL6	Q9H5J4	265 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	EXD2	Q9NVH0	621 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	VNN3	Q9NY84	501 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	COL5A3	P25940	1745 aa	Predicted RBP	4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	MAPK8IP3	Q9UPT6	1336 aa		4.21	□□□□□ -1.74
HCFC2-204	ENST00000550335	UBR3	Q6ZT12	1888 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	TRAV25	A0A0B4J276	109 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	C12orf71	A8MTZ7	269 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	EED	O75530	441 aa	Known RBP	4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	KLF8	O95600	359 aa	Predicted RBP	4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	SERPINA5	P05154	406 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	CALM1	P0DP23	149 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	CALM2	P0DP24	149 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	CALM3	P0DP25	149 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	ZNF250	P15622	560 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	CD1B	P29016	333 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	GPR6	P46095	362 aa	Predicted RBP	4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	CDKN1B	P46527	198 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	TFPI2	P48307	235 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	SUB1	P53999	127 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	DLX1	P56177	255 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	EIF3E	P60228	445 aa	Known RBP	4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	ZNF763	Q0D2J5	394 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	SLC39A6	Q13433	755 aa		4.2	□□□□□ -1.74
HCFC2-204	ENST00000550335	CYTH1	Q15438	398 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms