RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 HDDC2Q7Z4H3 204 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 ZDHHC21Q8IVQ6 265 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 ZNF101Q8IZC7 436 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 CCDC197Q8NCU1 140 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 POM121L2Q96KW2 1035 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 TSSK2Q96PF2 358 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 RBP7Q96R05 134 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 GPX7Q96SL4 187 aaPredicted RBP10.12□□□□□ -0.79
LETMD1-221ENST00000550100 SOX7Q9BT81 388 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 ZNF416Q9BWM5 594 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 OR2H1Q9GZK4 316 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 TAS2R1Q9NYW7 299 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 TMEM5Q9Y2B1 443 aa10.12□□□□□ -0.79
LETMD1-221ENST00000550100 FBN1P35555 2871 aaKnown RBP10.12□□□□□ -0.79
LETMD1-221ENST00000550100 IGHV4-61A0A0C4DH41 118 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 A0A1W2PPL8 197 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 A6NIZ1 184 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 CD5LO43866 347 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 GMNNO75496 209 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 NDUFB2O95178 105 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 STAMBPO95630 424 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 PPP1R3DO95685 299 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 NGFP01138 241 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 HPXP02790 462 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 CST2P09228 141 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 NAT2P11245 290 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 BMP4P12644 408 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 COL8A2P25067 703 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 RBMXP38159 391 aaKnown RBP10.11□□□□□ -0.79
LETMD1-221ENST00000550100 NR4A2P43354 598 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 GSSP48637 474 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 UCP2P55851 309 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 RAP1BP61224 184 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 RAP1AP62834 184 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 LOXL1Q08397 574 aaPredicted RBP10.11□□□□□ -0.79
LETMD1-221ENST00000550100 CARTPTQ16568 116 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 TMEM249Q2WGJ8 235 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 ELFN2Q5R3F8 820 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 OR4C15Q8NGM1 316 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 ZNF570Q96NI8 536 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 POFUT1Q9H488 388 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 POLE4Q9NR33 117 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 ACTR3BQ9P1U1 418 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 STX18Q9P2W9 335 aaKnown RBP10.11□□□□□ -0.79
LETMD1-221ENST00000550100 GRHPRQ9UBQ7 328 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 REV1Q9UBZ9 1251 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 SLC7A8Q9UHI5 535 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 DUSP13Q9UII6 198 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 ATRQ13535 2644 aa10.11□□□□□ -0.79
LETMD1-221ENST00000550100 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SYNGR3O43761 229 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SLC16A7O60669 478 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 NCR1O76036 304 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SNAP29O95721 258 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 TXNDC12O95881 172 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 FABP3P05413 133 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 IGHV4-31P0DP07 118 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 DAOP14920 347 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 ZNF250P15622 560 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 CCNOP22674 350 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 STOMP27105 288 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SDHAP31040 664 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 IL2RGP31785 369 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 MPV17P39210 176 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 EVX1P49640 407 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 PDLIM4P50479 330 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 HMGA2P52926 109 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 GALK2Q01415 458 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 KRR1Q13601 381 aaKnown RBP10.1□□□□□ -0.79
LETMD1-221ENST00000550100 RFX4Q33E94 735 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 KRTAP21-3Q3LHN1 58 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SPATS1Q496A3 300 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SPATA46Q5T0L3 261 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 FAM205BPQ63HN1 556 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 ZNF770Q6IQ21 691 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-221ENST00000550100 PGBD2Q6P3X8 592 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 DPY19L2P2Q6ZN68 376 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 OR9Q2Q8NGE9 314 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SLC7A6Q92536 515 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SAMD8Q96LT4 415 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 BTBD10Q9BSF8 475 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 BPESC1Q9GZL8 116 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 NUAK2Q9H093 628 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SYT4Q9H2B2 425 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 CCNB1IP1Q9NPC3 277 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 VSX1Q9NZR4 365 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-221ENST00000550100 AURKCQ9UQB9 309 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 COA3Q9Y2R0 106 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-221ENST00000550100 LYVE1Q9Y5Y7 322 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.1□□□□□ -0.798e-8■■■■□ 23.6
LETMD1-221ENST00000550100 IGLV3-9A0A075B6K5 115 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 IQCMA0A1B0GVH7 501 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 C5orf49A4QMS7 147 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 LRP5LA4QPB2 252 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 ACOT8O14734 319 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 SLC25A16P16260 332 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 ITGA2P17301 1181 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 MSR1P21757 451 aa10.1□□□□□ -0.79
LETMD1-221ENST00000550100 USF1P22415 310 aaPredicted RBP10.1□□□□□ -0.79
LETMD1-221ENST00000550100 CALB2P22676 271 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms