RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 NANOGP1Q8N7R0 232 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 POMGNT2Q8NAT1 580 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 SLC26A10Q8NG04 563 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 OR10H4Q8NGA5 316 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 OR13F1Q8NGS4 319 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 OR6N2Q8NGY6 317 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 NSMAFQ92636 917 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 HTRA1Q92743 480 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 SNRNP40Q96DI7 357 aaKnown RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 INTS14Q96SY0 518 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 SLX1AQ9BQ83 275 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 TTTY10Q9BZA0 68 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 PRRG4Q9BZD6 226 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 RBM38Q9H0Z9 239 aaKnown RBP7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 RNF122Q9H9V4 155 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 BCO1Q9HAY6 547 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 KLHL9Q9P2J3 617 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 CFAP46Q8IYW2 2715 aa7.15□□□□□ -1.26
DEPDC4-207ENST00000549249 SMG1Q96Q15 3661 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 TMEM129A0AVI4 362 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 SLC22A20A6NK97 555 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ADARB2-AS1A8MUL3 147 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 GPR171O14626 319 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 MAGEB4O15481 346 aaPredicted RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 AKAP8O43823 692 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 SLC43A1O75387 559 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 SEC14L2O76054 403 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 WNT11O96014 354 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 LALBAP00709 142 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 OR2T7P0C7T2 308 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 MYL12AP19105 171 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 PSMB9P28065 219 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 GRNP28799 593 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 LAP3P28838 519 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 AGTR1P30556 359 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 CDAP32320 146 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ATP6V1E1P36543 226 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 TGFBR2P37173 567 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 CENPAP49450 140 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 WNT4P56705 351 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 HSF2Q03933 536 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 RNPS1Q15287 305 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 GUSBP1Q15486 140 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF684Q5T5D7 378 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 RTL6Q6ICC9 239 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 DNM1P34Q6PK57 102 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 FOXL2NBQ6ZUU3 175 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF367Q7RTV3 350 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 CD163Q86VB7 1156 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ACBD7Q8N6N7 88 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 C9orf106Q8NAJ2 232 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 OR6N1Q8NGY5 312 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 OR2T27Q8NH04 317 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 FNDC8Q8TC99 324 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 SPRYD4Q8WW59 207 aaPredicted RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 C11orf40Q8WZ69 217 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 FCGR1BQ92637 280 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 RORBQ92753 470 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 OPALINQ96PE5 141 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ALKBH3Q96Q83 286 aaPredicted RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 RBP7Q96R05 134 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 TRIB1Q96RU8 372 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 AMELYQ99218 206 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 MDFIQ99750 246 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ALG8Q9BVK2 526 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 MND1Q9BWT6 205 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 GSX2Q9BZM3 304 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ULBP2Q9BZM5 246 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 YIPF3Q9GZM5 350 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 NAA50Q9GZZ1 169 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 SLC25A18Q9H1K4 315 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ISG20L2Q9H9L3 353 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 CALHM2Q9HA72 323 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 BATF3Q9NR55 127 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 INPP5EQ9NRR6 644 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ASF1BQ9NVP2 202 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 KCNG2Q9UJ96 466 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ERGIC3Q9Y282 383 aa7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 NOSIPQ9Y314 301 aaKnown RBP7.14□□□□□ -1.27
DEPDC4-207ENST00000549249 ASH1LQ9NR48 2969 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 A0A1W2PPL8 197 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 DAPL1A0PJW8 107 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 CD8B2A6NJW9 211 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 AHRRA9YTQ3 701 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 MYL12BO14950 172 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 DHHO43323 396 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 SS18L1O75177 396 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 ABHD16AO95870 558 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 HLA-DQA2P01906 255 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 TPOP07202 933 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 YES1P07947 543 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 FCGR2AP12318 317 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 ALOX5APP20292 161 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 LIPAP38571 399 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 ENTPD1P49961 510 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 BLVRAP53004 296 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 FOXG1P55316 489 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 ACTC1P68032 377 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 ACTA1P68133 377 aa7.13□□□□□ -1.27
DEPDC4-207ENST00000549249 ADAM8P78325 824 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms