RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ZNF85Q03923 595 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 FOXF1Q12946 379 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 HSPB2Q16082 182 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 ZNF404Q494X3 552 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 B3GLCTQ6Y288 498 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 TRILQ7L0X0 811 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 LRRC75A-AS1Q8N1F1 130 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 SYS1Q8N2H4 156 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 ARIH2OSQ8N7S6 290 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 RELL2Q8NC24 303 aaPredicted RBP17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 OR2M7Q8NG81 312 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 OR10H4Q8NGA5 316 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 SGCZQ96LD1 299 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 Q96MF0 132 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 TTTY12Q9BZ98 90 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 TXNIPQ9H3M7 391 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 ZNF346Q9UL40 294 aaKnown RBP17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 LIPGQ9Y5X9 500 aa17.71■□□□□ 0.43
CTDSP2-204ENST00000548823 LALBAP00709 142 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 F13BP05160 661 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 GYPBP06028 91 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 GABRA1P14867 456 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 CENPAP49450 140 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 RPS3AP61247 264 aaKnown RBP17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 RPL27P61353 136 aaKnown RBP17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 ACTA2P62736 377 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 ACTG2P63267 376 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 ZNF846Q147U1 533 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 LINC01590Q5TEZ4 76 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 SLC22A10Q63ZE4 541 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 PRSS57Q6UWY2 283 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 IL20RBQ6UXL0 311 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 PLCZ1Q86YW0 608 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 WDSUB1Q8N9V3 476 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 OR2T4Q8NH00 348 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 MCFD2Q8NI22 146 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 POC1BQ8TC44 478 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 SLC25A43Q8WUT9 341 aaPredicted RBP17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 ZBTB8AQ96BR9 441 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 SARAFQ96BY9 339 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 SLC25A36Q96CQ1 311 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 C1GALT1C1Q96EU7 318 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 MNTQ99583 582 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 MED18Q9BUE0 208 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 EXOSC4Q9NPD3 245 aaKnown RBP17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 TRIM36Q9NQ86 728 aa17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 TXNL4BQ9NX01 149 aaKnown RBP17.7■□□□□ 0.42
CTDSP2-204ENST00000548823 DVL2O14641 736 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 CRLF1O75462 422 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 GLSO94925 669 aaPredicted RBP17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 OR6A2O95222 327 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 IL1AP01583 271 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 HLA-DPB1P04440 258 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 SOX6P35712 828 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 TRAM1Q15629 374 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 MESTQ5EB52 335 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 SLC35F2Q8IXU6 374 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 FAM109AQ8N4B1 249 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 ADPRHL1Q8NDY3 354 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 ATP6V1C2Q8NEY4 427 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 OR4K17Q8NGC6 315 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 ZNF519Q8TB69 540 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 ZMYND19Q96E35 227 aaPredicted RBP17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 CDADC1Q9BWV3 514 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 OR11A1Q9GZK7 315 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 WDR12Q9GZL7 423 aaKnown RBP17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 HMG20AQ9NP66 347 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 AKIP1Q9NQ31 210 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 ALKBH4Q9NXW9 302 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 VDAC3Q9Y277 283 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 GSTK1Q9Y2Q3 226 aa17.69■□□□□ 0.42
CTDSP2-204ENST00000548823 A0A075B6Q4 140 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 CLDN25C9JDP6 229 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 SNPHO15079 494 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 SNX4O95219 450 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 TFP02787 698 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 CD1AP06126 327 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 BMP5P22003 454 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 BLVRAP53004 296 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 CDONQ4KMG0 1287 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 EEF1A1P5Q5VTE0 462 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 C3orf33Q6P1S2 294 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 H1FNTQ75WM6 255 aaPredicted RBP17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 VASH1Q7L8A9 365 aaPredicted RBP17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 KLBQ86Z14 1044 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 ZPLD1Q8TCW7 415 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 TMEM41AQ96HV5 264 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 ALG12Q9BV10 488 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 RNF167Q9H6Y7 350 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 MARCH7Q9H992 704 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 HPF1Q9NWY4 346 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 FKBP7Q9Y680 259 aa17.68■□□□□ 0.42
CTDSP2-204ENST00000548823 A0A1W2PQL4 384 aaPredicted RBP17.67■□□□□ 0.42
CTDSP2-204ENST00000548823 RNF13O43567 381 aa17.67■□□□□ 0.42
CTDSP2-204ENST00000548823 PLPP2O43688 288 aa17.67■□□□□ 0.42
CTDSP2-204ENST00000548823 MRPL3P09001 348 aaKnown RBP17.67■□□□□ 0.42
CTDSP2-204ENST00000548823 OPRL1P41146 370 aa17.67■□□□□ 0.42
CTDSP2-204ENST00000548823 MAGEA5P43359 124 aa17.67■□□□□ 0.42
CTDSP2-204ENST00000548823 RPS25P62851 125 aaKnown RBP17.67■□□□□ 0.42
CTDSP2-204ENST00000548823 ZNF239Q16600 458 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms