RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SYNDIG1Q9H7V2 258 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 POPDC2Q9HBU9 364 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 SPTBN4Q9H254 2564 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 CHD8Q9HCK8 2581 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 VPS13AQ96RL7 3174 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 PVALEFA0A1B0GWK0 134 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 KIF2AO00139 706 aaPredicted RBP2.87□□□□□ -1.95
PTCH1-216ENST00000548379 NBR2O15453 112 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 ZW10O43264 779 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 OR10H3O60404 316 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 SCGNO76038 276 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 TNFSF15O95150 251 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 ASS1P00966 412 aaKnown RBP2.87□□□□□ -1.95
PTCH1-216ENST00000548379 APOEP02649 317 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 ALOX5P09917 674 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 NPR2P20594 1047 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 CCNCP24863 283 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 CSKP41240 450 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 RGRP47804 291 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 OR3A4PP47883 348 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 CCT3P49368 545 aaKnown RBP2.87□□□□□ -1.95
PTCH1-216ENST00000548379 INCA1Q0VD86 236 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 EIF3IQ13347 325 aaKnown RBP2.87□□□□□ -1.95
PTCH1-216ENST00000548379 GRB7Q14451 532 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 STK38Q15208 465 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 DPYSL2Q16555 572 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 TRIM16LQ309B1 348 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 KCTD21Q4G0X4 260 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 GPRC6AQ5T6X5 926 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 TMEM215Q68D42 235 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 OR4F3Q6IEY1 312 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 PMF1Q6P1K2 205 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 ACOT7LQ6ZUV0 252 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 TAS2R42Q7RTR8 314 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 SCD5Q86SK9 330 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 TRIM69Q86WT6 500 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 BBS1Q8NFJ9 593 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 OR4C6Q8NH72 309 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 BRSK1Q8TDC3 778 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 C7orf33Q8WU49 177 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 CHCHD10Q8WYQ3 142 aaPredicted RBP2.87□□□□□ -1.95
PTCH1-216ENST00000548379 OR8D1Q8WZ84 308 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 NAT6Q93015 286 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 NEIL2Q969S2 332 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 ZNF396Q96N95 335 aaPredicted RBP2.87□□□□□ -1.95
PTCH1-216ENST00000548379 SERPINB11Q96P15 392 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 NPAS2Q99743 824 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 CAPS2Q9BXY5 557 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 ULBP1Q9BZM6 244 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 TRIM4Q9C037 500 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 NCOR1P1Q9H4R4 102 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 ZSCAN16Q9H4T2 348 aaPredicted RBP2.87□□□□□ -1.95
PTCH1-216ENST00000548379 STOML2Q9UJZ1 356 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 CAB39Q9Y376 341 aaPredicted RBP2.87□□□□□ -1.95
PTCH1-216ENST00000548379 TMED5Q9Y3A6 229 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 DOCK5Q9H7D0 1870 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 WDR87Q6ZQQ6 2873 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 CACNA1BQ00975 2339 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 USP24Q9UPU5 2620 aa2.87□□□□□ -1.95
PTCH1-216ENST00000548379 PATJQ8NI35 1801 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 COL4A2P08572 1712 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 CFAP47Q6ZTR5 3102 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 TMEM110-MUSTN1A8MSY1 372 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 IDSB3KWA1 339 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 F5H5T6 163 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 H0Y8G0 127 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 KPNA3O00505 521 aaPredicted RBP2.86□□□□□ -1.95
PTCH1-216ENST00000548379 SLC31A1O15431 190 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 RAMP3O60896 148 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 LGI1O95970 557 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 HLA-DRAP01903 254 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 SLC2A3P11169 496 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 DBTP11182 482 aaKnown RBP2.86□□□□□ -1.95
PTCH1-216ENST00000548379 NTSP30990 170 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 GTF2H1P32780 548 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 CD70P32970 193 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 ATP5OP48047 213 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 GCLMP48507 274 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 AIF1P55008 147 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 NDPQ00604 133 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 ADIGQ0VDE8 80 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 BST2Q10589 180 aaKnown RBP2.86□□□□□ -1.95
PTCH1-216ENST00000548379 GOLGA7BQ2TAP0 167 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 C9orf64Q5T6V5 341 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 ATL3Q6DD88 541 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 SPOPLQ6IQ16 392 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 EFL1Q7Z2Z2 1120 aaKnown RBP2.86□□□□□ -1.95
PTCH1-216ENST00000548379 NRMQ8IXM6 262 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 SLC35F2Q8IXU6 374 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 STK40Q8N2I9 435 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 MTURNQ8N3F0 131 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 SLC25A45Q8N413 288 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 ATP6V0D2Q8N8Y2 350 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 MFSD9Q8NBP5 474 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 FBXL13Q8NEE6 735 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 OR9A1PQ8NGU1 263 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 LINC01006Q8NI28 216 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 LMX1AQ8TE12 382 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 HTR3CQ8WXA8 447 aa2.86□□□□□ -1.95
PTCH1-216ENST00000548379 OR1E3Q8WZA6 343 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms