RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 FNDC11Q9BVV2 318 aa5.74□□□□□ -1.49
SCAF11-211ENST00000547950 BCL2L14Q9BZR8 327 aa5.74□□□□□ -1.49
SCAF11-211ENST00000547950 POLR2J2Q9GZM3 115 aaKnown RBP5.74□□□□□ -1.49
SCAF11-211ENST00000547950 POLR2J3Q9H1A7 115 aaKnown RBP5.74□□□□□ -1.49
SCAF11-211ENST00000547950 TXNIPQ9H3M7 391 aa5.74□□□□□ -1.49
SCAF11-211ENST00000547950 LPAR2Q9HBW0 351 aa5.74□□□□□ -1.49
SCAF11-211ENST00000547950 CCNB1IP1Q9NPC3 277 aa5.74□□□□□ -1.49
SCAF11-211ENST00000547950 HINT3Q9NQE9 182 aaKnown RBP5.74□□□□□ -1.49
SCAF11-211ENST00000547950 ZNF446Q9NWS9 450 aa5.74□□□□□ -1.49
SCAF11-211ENST00000547950 CMTM6Q9NX76 183 aa5.74□□□□□ -1.49
SCAF11-211ENST00000547950 TREM2Q9NZC2 230 aa5.74□□□□□ -1.49
SCAF11-211ENST00000547950 ZNF346Q9UL40 294 aaKnown RBP5.74□□□□□ -1.49
SCAF11-211ENST00000547950 A4GNTQ9UNA3 340 aa5.74□□□□□ -1.49
SCAF11-211ENST00000547950 TRAV27A0A087WT01 109 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 IGKV1D-43A0A0B4J1Z2 117 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 C5orf49A4QMS7 147 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 C17orf100A8MU93 164 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 EFCAB9A8MZ26 197 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 CENPBD1B2RD01 187 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 B4DSR2 109 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 J3KTA2 159 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 CXCR6O00574 342 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 SPRY3O43610 288 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 MGRN1O60291 552 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 NCR1O76036 304 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 IGF2P01344 180 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 IFNW1P05000 195 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 MMP7P09237 267 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 ZNF250P15622 560 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 ZNF32P17041 273 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 ACHEP22303 614 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 LAP3P28838 519 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 THBS2P35442 1172 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 GDI2P50395 445 aaKnown RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 CDH15P55291 814 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 RPL27P61353 136 aaKnown RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 ERVK-25P63136 954 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 MRPS34P82930 218 aaKnown RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 PSG4Q00888 419 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 MVKQ03426 396 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 TRAM2Q15035 370 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 MOGQ16653 247 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 NRN1LQ496H8 165 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 SPATA46Q5T0L3 261 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 THEM4Q5T1C6 240 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 C10orf128Q5T292 105 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 FAHD2BQ6P2I3 314 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 SLC25A47Q6Q0C1 308 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 UGT2A3Q6UWM9 527 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 RINLQ6ZS11 566 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 RRM2BQ7LG56 351 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 OAFQ86UD1 273 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 NRMQ8IXM6 262 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 CLDND2Q8NHS1 167 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 RP9Q8TA86 221 aaKnown RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 SNX33Q8WV41 574 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 LIPHQ8WWY8 451 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 GTF3AQ92664 365 aaKnown RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 YIPF5Q969M3 257 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 FAHD2AQ96GK7 314 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 PRRC1Q96M27 445 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 SEPHS2Q99611 448 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 C1orf198Q9H425 327 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 EFCAB1Q9HAE3 211 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 ZNF275Q9NSD4 429 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 DECR2Q9NUI1 292 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 SLCO1C1Q9NYB5 712 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 STX18Q9P2W9 335 aaKnown RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 EIF3KQ9UBQ5 218 aaKnown RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 HIF3AQ9Y2N7 669 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 UGT2A1Q9Y4X1 527 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 TIMM10BQ9Y5J6 103 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 ABCA1O95477 2261 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 MXRA5Q9NR99 2828 aa5.73□□□□□ -1.49
SCAF11-211ENST00000547950 ANK3Q12955 4377 aaKnown RBP5.73□□□□□ -1.49
SCAF11-211ENST00000547950 FBN3Q75N90 2809 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 LOC100509620A0A075B734 347 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 A0A1W2PPL8 197 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 HTR3EA5X5Y0 456 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 FAM157AC9JC47 383 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 FFAR1O14842 300 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 CCDC22O60826 627 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 RP2O75695 350 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 SNAP29O95721 258 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 SERPINA1P01009 418 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 MT-ND5P03915 603 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 TSPAN19P0C672 248 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 COX4I1P13073 169 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 NCK1P16333 377 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 GCH1P30793 250 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 RPL4P36578 427 aaKnown RBP5.72□□□□□ -1.49
SCAF11-211ENST00000547950 WNT5AP41221 380 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 SLC7A2P52569 658 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 ZNF133P52736 654 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-211ENST00000547950 DVL1P1P54792 670 aaPredicted RBP5.72□□□□□ -1.49
SCAF11-211ENST00000547950 MRPS11P82912 194 aaKnown RBP5.72□□□□□ -1.49
SCAF11-211ENST00000547950 PRKCDQ05655 676 aa5.72□□□□□ -1.49
SCAF11-211ENST00000547950 TAF11Q15544 211 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms